Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi513g00002 ATGGCTCAAAATGCTAGGACAAGCAGATCTTCCTTTAGCTCTAGCAATGGCAATGACGATACCCCTGTAAACAACTGTGCTGCTGTTAGCAATACTGATGACTATGATAGTGATAGTTCCAGTTATGCACCATCCACACCGTCAGTTCTGTCAACAGCTGTTCCAGCAGAACTTGCTGGAGCTGTACCCTTGATTGACAGATTCCAGGTGGATGGATTTTTAAAGTCAATGCAGAAACAAATTCAATCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTGTAGGTCCCCAAGCTCGAGAAAAATTTACATTTGAGGACATGTTGTGTTTTCAAAAGGATCCAATACCAACAGCATTGCTTAAGATTAATGGTGATTTAGTAAGTCGGGCAACAAAATTATTCCAGATAATTTTGAAATATATGGGAGTTGATTCATCTGATCGTGTAACTCCAATAAGCTTAGATGAACGAGTTGAGCTCGCAGGGAAGCTATACAAGCAATGTTTGAAGCGTTCAGAACTCCGAGATGAACTTTTTGTTCAGATATCAAAACAAACAAGAAATAATCCTGAGAGGCAATGCTTGATCAAAGCATGGGAGCTTATGTACTTATGTGCATCCTCCATGTCTCCTAGTAAAGACATTGGCGGTTATCTGTCAGAATACATTCATAACATAGCACATGCTGTGGGTACTGATCCTGAGATCCAAGCCCTCGCATTAAATACATTGAATGCTTTGAAGCGTTCTGTCAAGGCTGGTCCTAGACATATAATACCTGGGCGAGAGGAGATTGAAGCTCTGTTGACTAGGAGAAAGCTTACAACTATAGTGTTCTTCCTAGATGAAACATTTGAAGAAATTACATATGACATGTCAACAACAGTTGCTGATGCTGTTGAGGAGTACATTGGGTTGGATGATAACAAATATATTGGGGATCTCTTGGCGGAATTTAAAGCATCAAAGGATCGAAGTAAGGGAGAAATCTTGCACTGTAAACTGATATTCAAGAAAAAGTTATTTCGTGAGTCAGATGAAGCTGTGACAGATCCAATGTTTGTGCAATTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAATTATCCTATTGGAAGGGATGATGCTGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATTTATTAGCACACCTGAATCATGCACTAACTGGAATTCACTTCTGGAGCGTTTCCTTCCTAGACAAATTTCAATGACACGGGCGAAACGAGAATGGGAGTTTGATATTCTTTCTCGTTATCATTCATTGGTGCATCTGACAAAAGATGATGCAAGACAACAATTTCTTCGTATATTGAGAGCACTTCCTTATGGGAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTTCTACCTGGACGAATAATATTAGGAATTAATAAAAGAGGGATTCATTTTTTTCGTCCAGTTCCTAAGGAGTATTTACACTCAGCTGAATTGAGAGACATAATGCAATTTGGAAGCAGCAATACAGCAGTCTTTTTTAAAATGCGAGTAGCAGGTGTTCTTCATATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGCGTAGCTCTTCAAACACATATAAATGATGTAATGCTGCGCCGCTATTCGAAAGCACGATCCGCTGTTGGTGGTTCTATGAATGGAGATATTTCTAATAATTTCAAGCCTCCTAATTTAGAATTATATGAGAAGCGTATTCAAGATTTATCAAAACATGTTGAAGAATCTCAAAGAAATGCTGATCAATTATTTCAAGAATTGCATGAGAAGCAAGAGCAAGAAGAGAAAATGCAAGAAGAATTGGAGGGATTGAAGGAATCCTTAAAAGCTGATAAGCAAAACCTTGAGGCAGTTACAAGTGACTGTGATAGGCTTAGATCATTATGCAAAGAAAAAGATGAGGCACTGCAGGCTGCAATTCTAGAGAAAAGGAATATGGAAGCAAGGATGGCCAAGTTGAGTAATGCGGTGATAGAGAACACTGCCAAACAGGATCTTGTTGGAGCAAATAACGAAAGTAGTTCTCTTCAACGAAAATTTGAGCAAGAACGCAGAGCTGCGAAGTCTGTAGTGTGTGACCTTGAAAGAAAGCTAGAAGAGTGTAGACAAGAATTGGTGGCTGCTAAGTCTACTATTTCAGTCAAGGACTCTGACTTGGCTGCGTTGCAGAATAATTTAAAGGAGCTAGATGAATTGCGAGAAATGAAAGAGGACATTGATAGAAAAAATGAACAGACAGCTGCCATATTGAAGATGCAAGGGGCTCAACTAGCTGAAATGGAAATTCTTTATAAGGAAGAACAGGTTTTAAGGAAGCGTTATTTTAATATAATAGAAGACATGAAAGGCAAGATCAGAGTTTACTGTCGACTAAGACCTCTGAGTGAAAAGGAGATTGCTGATAAAGAAAGAGAAGCTCTTATTGCGGTAGATGAATATACTGTTGAATATCAATGGAAAGATGATAAGTCAAAGCAATACATATATGATCGTGTTTTTGGTGGTGATGCAACTCAAGAAAGTGTGTTTGAGGATACAAAGTATTTGGTACAATCTGCTGTAGATGGTTATAATGTTTGCATATTTGCTTATGGTCAGACTGGTTCTGGAAAGACATTTACAATTTATGGAAGTGAAGACAACCCCGGACTTACTCCTCGTGCTATTGCAGAACTTTTTAGAATTTTAAGAAGGGATAATAACAAGTATTCTTTTTCTTTGAAGGTTTACATGGTGGAATTATATCAAGATACCCTTATAGATCTACTGTTACCTAAGAATGCCAAGCATTTAAAATTGGATATCAAGAAGGATTCCACGGACAAGGATTTGGGGTGGATGATTGGATGTACTAAGGAACAGAATGGCCTTTACTACCTTGAAACATCTTGCCAGGCCAAGGACGAAATACCGTACTCTTTGATCTCTGAGTTTGTTTCAATACATCTGCATAAAATATTGCTTAATTATCAACTGAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCAGGCTCTACAGGGAGTCAACTCAAAGAAGCACAAAGTATCAACAAATCATTATCAGCACTTGGAGATGTTATAAGTGCTTTGTCTTCTGGTGGTCAACACACACCTTATAGGAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTGAATGTTTCTCCAGCAGAATCAAACTTGGATGAGACACATAACTCTCTAATGTATGCATCACGAGTGAGATCCATAGTGAATGACCCTAGCAAAAATGTTACTTCAAAAGAGATAGCACGACTGAAGAAGTTGGTTGCATATTGGAAACAGCAAGCTGGTAGAGGACTTGAGAATGAAGACTTGGAAGAAATTCAAGAAGAACGACCAACTAAAAGAGATGACAGATAG 3483 0.3833 MAQNARTSRSSFSSSNGNDDTPVNNCAAVSNTDDYDSDSSSYAPSTPSVLSTAVPAELAGAVPLIDRFQVDGFLKSMQKQIQSAGKRGFFSKRSVGPQAREKFTFEDMLCFQKDPIPTALLKINGDLVSRATKLFQIILKYMGVDSSDRVTPISLDERVELAGKLYKQCLKRSELRDELFVQISKQTRNNPERQCLIKAWELMYLCASSMSPSKDIGGYLSEYIHNIAHAVGTDPEIQALALNTLNALKRSVKAGPRHIIPGREEIEALLTRRKLTTIVFFLDETFEEITYDMSTTVADAVEEYIGLDDNKYIGDLLAEFKASKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVQLSYVQLQHDYILGNYPIGRDDAAQLSALQILAEIGFISTPESCTNWNSLLERFLPRQISMTRAKREWEFDILSRYHSLVHLTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAVGGSMNGDISNNFKPPNLELYEKRIQDLSKHVEESQRNADQLFQELHEKQEQEEKMQEELEGLKESLKADKQNLEAVTSDCDRLRSLCKEKDEALQAAILEKRNMEARMAKLSNAVIENTAKQDLVGANNESSSLQRKFEQERRAAKSVVCDLERKLEECRQELVAAKSTISVKDSDLAALQNNLKELDELREMKEDIDRKNEQTAAILKMQGAQLAEMEILYKEEQVLRKRYFNIIEDMKGKIRVYCRLRPLSEKEIADKEREALIAVDEYTVEYQWKDDKSKQYIYDRVFGGDATQESVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSEDNPGLTPRAIAELFRILRRDNNKYSFSLKVYMVELYQDTLIDLLLPKNAKHLKLDIKKDSTDKDLGWMIGCTKEQNGLYYLETSCQAKDEIPYSLISEFVSIHLHKILLNYQLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETHNSLMYASRVRSIVNDPSKNVTSKEIARLKKLVAYWKQQAGRGLENEDLEEIQEERPTKRDDR 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi513g00002 1160 Gene3D - 1118 1160 - -
Sebi513g00002 1160 Gene3D MyTH4 domain 91 273 IPR038185 -
Sebi513g00002 1160 ProSiteProfiles FERM domain profile. 264 555 IPR000299 GO:0005856
Sebi513g00002 1160 ProSiteProfiles MyTH4 domain profile. 111 270 IPR000857 GO:0005856
Sebi513g00002 1160 FunFam Kinesin-like calmodulin binding protein 344 455 - -
Sebi513g00002 1160 ProSiteProfiles Kinesin motor domain profile. 804 1110 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi513g00002 1160 SMART MyTH4_1 111 270 IPR000857 GO:0005856
Sebi513g00002 1160 Gene3D Kinesin motor domain 992 1117 IPR036961 -
Sebi513g00002 1160 SUPERFAMILY Prismane protein-like 747 808 IPR011254 GO:0003824|GO:0016491
Sebi513g00002 1160 Gene3D - 353 454 IPR014352 -
Sebi513g00002 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 804 1136 IPR027417 -
Sebi513g00002 1160 MobiDBLite consensus disorder prediction 1 43 - -
Sebi513g00002 1160 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 90 272 - -
Sebi513g00002 1160 SUPERFAMILY Second domain of FERM 339 456 IPR035963 -
Sebi513g00002 1160 Gene3D - 459 566 IPR011993 -
Sebi513g00002 1160 Pfam FERM central domain 347 461 IPR019748 -
Sebi513g00002 1160 MobiDBLite consensus disorder prediction 1140 1160 - -
Sebi513g00002 1160 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 459 568 - -
Sebi513g00002 1160 Gene3D Kinesin motor domain 746 974 IPR036961 -
Sebi513g00002 1160 SMART B41_5 271 461 IPR019749 -
Sebi513g00002 1160 CDD FERM_B-lobe 356 454 IPR019748 -
Sebi513g00002 1160 Pfam MyTH4 domain 164 268 IPR000857 GO:0005856
Sebi513g00002 1160 Coils Coil 732 769 - -
Sebi513g00002 1160 CDD FERM_C_KCBP 458 564 - -
Sebi513g00002 1160 PANTHER MYOSIN VII, XV 3 810 - -
Sebi513g00002 1160 SMART kinesin_4 802 1118 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi513g00002 1160 Coils Coil 649 676 - -
Sebi513g00002 1160 PRINTS Kinesin heavy chain signature 876 897 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi513g00002 1160 PRINTS Kinesin heavy chain signature 1011 1029 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi513g00002 1160 PRINTS Kinesin heavy chain signature 1060 1081 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi513g00002 1160 Coils Coil 579 641 - -
Sebi513g00002 1160 MobiDBLite consensus disorder prediction 1137 1160 - -
Sebi513g00002 1160 Pfam Microtubule binding 785 943 IPR031852 GO:0008017
Sebi513g00002 1160 SUPERFAMILY PH domain-like 461 549 - -
Sebi513g00002 1160 Pfam Kinesin motor domain 1011 1110 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi513g00002 Sebi-Chr513 79092 89606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi513g00002 21 1159 Calmodulin-binding Proteins AT5G65930 65.665 0.0 1630