Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi512g00017 ATGTACCACCGTAGATTCAACGCCCAATCATTATATGTCGCTGACCCAGATGAGCCCGAGCCCGAGCCCATCTCAGAAGCCGGGCCTGCTTCTCCTTCTTCCGAGTTTCATGTTCATGATAGGAGGGAGATGAAGAAGAGGGTGGTGACTATACCGATCGGTGACGTGGATGGATCTAAGAGTAAAGGAGAGACATATCCACCGTCTGATTCGTGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAGGGCTCCCCTTATCCCAGGAGTTTGCTAGAACTTGAAGTGCACGGCGGAATTGTGGAGGATCGTGGCCGCCGCCGGCGTAGAAAAACCGGTTTAGGGCGGCTGTGCTAA 357 0.5434 MYHRRFNAQSLYVADPDEPEPEPISEAGPASPSSEFHVHDRREMKKRVVTIPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRSLLELEVHGGIVEDRGRRRRRKTGLGRLC 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi512g00017 118 MobiDBLite consensus disorder prediction 1 42 - -
Sebi512g00017 118 Pfam WRKY DNA -binding domain 70 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi512g00017 118 SMART WRKY_cls 68 104 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi512g00017 118 ProSiteProfiles WRKY domain profile. 69 109 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi512g00017 118 SUPERFAMILY WRKY DNA-binding domain 64 90 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi512g00017 118 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 20 90 IPR044810 GO:0003700
Sebi512g00017 118 Gene3D WRKY domain 42 101 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi512g00017 Sebi-Chr512 294747 295360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi512g00017 3 89 WRKY Transcription Factor Family AT3G58710 55.319 6.08e-25 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi512g00017 WRKY 6.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi512g00017 - - cam:101504205 142.895