Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi511g00010 ATGGATTCGTCCTACCATCCCGCTAAATTTCAACTCAAGAATGTTAAGAGAAGTTTAGTTTTTTCAAAGGGCCTGCCAGCATTGTATAGTAGTAGATATCAAATCCATCACCAAAGCAGCTCCATAGTAGAGGATGAACTTGATCCGTTTTCAATGGTTGCTGATGAACTATCACTTCTTGGCAACAATCTGCGAGAAATGGTAGAGGCTGAGGTTCCTAAGCTTGCCTCAGCTGCTGAATACTTCTTCAAAATGGGGGTAGAAGGAAAAAGATTTCGTCCTACAGTTTTATTGTTAATGTCAACAGCATTAAATCTACCAATACCCAAAGCACCTCCTCCTATTGAGCTAGGAGGTACTTTTACAACTGATCGTTCAAGACAACAACGCATAGCTGAAATAACAGAGATGATCCATGTGGCAAGTCTTCTTCATGATGATGTATTGGATGATGCAGATACCAGGCGTGGTATTGGTTCGTTAAATTTCGTAATGGGCAATAAGTTGGCAGTATTGGCTGGGGATTTTTTGCTTTCTCGGGCTTGTGTTACTCTGGCCTCCTTAAAGAACACAGAGGTTGTATCTTTGTTGGCAAAAGTTGTAGAGCATCTGGTAACTGGAGAGACCATGCAAATGACTACAACATCTGATCAACGGTGTAGCATGGAATATTATATGCAAAAGACATATTACAAGACTGCATCGTTAATATCAAATAGTTGCAAGGCAATAGCCATCCTTGCGGGGCAAACAGCAGAAGTTGCAATGCTTGCTTTTGAATATGGAAAAAATCTGGGTTTGGCGTTTCAATTAATAGATGATGTGCTGGATTTCACAGGCACATCAGCTTCCCTTGGAAAGGGTTCTTTATCAGACATCCGCCATGGAATTGTTACAGCTCCAATATTGTTTGCGATGGAGGAGTTCCCTCAGTTGCGTGCAATTGTTGACGAGGGCTTTGAAAACCCTGAGAATGTTGATCTTGCTCTGGAGTATCTTGGTAAGAGCCAAGGTATACAAAGGACAAGGGAGCTAGCCATGAAGCATGCTAACCTTGCAGCAACAGCAATTGATTCCTTACCTGAGAGTGACGATGAGGAAGTTGTTAGTCTCACTCCCTACATGTATGATTATGTCCTAAAAAATGTTCGAGAACCAGAGATTCTGAAGCAACTTCGTGAGGAGATGGCTTCTATGCGTGGAAGTCAGATGCAGTGGTCTCCTGATCAGGTAGACACCTGCTTGCAATGCTTGTAG 1257 0.4232 MDSSYHPAKFQLKNVKRSLVFSKGLPALYSSRYQIHHQSSSIVEDELDPFSMVADELSLLGNNLREMVEAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPKAPPPIELGGTFTTDRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVTLASLKNTEVVSLLAKVVEHLVTGETMQMTTTSDQRCSMEYYMQKTYYKTASLISNSCKAIAILAGQTAEVAMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRAIVDEGFENPENVDLALEYLGKSQGIQRTRELAMKHANLAATAIDSLPESDDEEVVSLTPYMYDYVLKNVREPEILKQLREEMASMRGSQMQWSPDQVDTCLQCL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi511g00010 418 ProSitePatterns Polyprenyl synthases signature 1. 143 157 IPR033749 -
Sebi511g00010 418 FunFam Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 42 376 - -
Sebi511g00010 418 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 36 366 - -
Sebi511g00010 418 SUPERFAMILY Terpenoid synthases 44 364 IPR008949 -
Sebi511g00010 418 Pfam Polyprenyl synthetase 74 332 IPR000092 GO:0008299
Sebi511g00010 418 ProSitePatterns Polyprenyl synthases signature 2. 265 277 IPR033749 -
Sebi511g00010 418 SFLD Isoprenoid Synthase Type I 87 363 - -
Sebi511g00010 418 Gene3D Farnesyl Diphosphate Synthase 40 379 IPR008949 -
Sebi511g00010 418 CDD Trans_IPPS_HT 70 364 IPR000092 GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi511g00010 Sebi-Chr511 296906 314770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi511g00010 365 410 Monolignol Biosynthesis Gene Families AT3G62000 71.739 6.59e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi511g00010 K14066 - gmx:100780374 631.328