Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi510g00042 ATGATATTGAAATCGCTTTCTGTAGGTGGTTCCTCTGAAATGAAGATCCAGAAAATGCTCGGTGATATCTCTAACACTCAACCTTACTCATTCACTCACTCGATTCAAAATTTGAGATCCGAAATTGAAGAGAAAGAGAGAGAAACGATGTTGTTACCTTCAAATCCCACTGATGACAGTTCTCTCATTTGTCCGCTGCCACAAGCTCTCCTCGAGAGGCTCAAGAACTATGGTCAAGAAGAAGTGATTGTCCTCTGGGAGGAGCTCTCCCTTGAGGAACGGGACCTTTTCGTCAAGAAAATCAAGAGTTTAGATCTTTCGAGAATTGATCGGATTATTCGGTGTTTCCTTCGATCTCGTCCAACATCACAATTGTTTGGGGATGAGGAAGTCCAACTTTGGAAGCCATTCAGAGATAAATTGGAAACAATCATGGTAATGCTTGATAAACGTTACATTGATGATTCTAATTTTACTTGGTTTAGGGATACACATAAGGTGTTTGATAATTTGTCTGAGAGGCTAACTGTGAACGTGGATGTACTCCAAATGTGGGTTCTGATCTCCAATTTCAAGTTAGCATACAATCTTCTTCGTCGCCCTGATGGAACTTTCAACCGTGACTTAGCAGAGCTCCTTGATCGGAATGTTTCTACAAATACTAACCCTGTGGATGGAGTGTTCTCTTTTGATGTTATTGTGGACAGGGAAACGAATCTACTTACTCGAATCTACCGGCCTGCTGAGGGGGAGAAGATAGCCATGCGTGCACTTGAAAACAGGTACCCTTGTGCATATGAAGATGAGAAGCGTCTAGATGGCAGATACTTTGTGAGAGTTCAAGATCGAGACTGTCACCAGAACCCAGTTGAATTGGATAGGTTGAAGAAGGCACATATTCGGGATGGTGCTTCCATTGTTCATTTAAGGGAAAAGGAAGCTGAGACACAAGATTTTATTGGAGCTGTTGGAGCTAGTGGATTCGTCAAAGTAGCCATGAAGACTAAAAGCTACGGTGTTGTGAAAAGGTCCGCCGCTTGTAAGTCATCATCATCGTCCTCCATTGCGCGAAGGCACTACTGTGCGTGTGGTGAGGAAGTGACACTGTTGAAGTCGAACTCTGTAAGAAATCCTGGGAGAATATTCTGGAGATGCCCTAACTGGGATAAAGAGAAGAATTGTGGTTATTTTCGCTGGGCTGATGACGAGGCTTCAGAGCAACGAGGAAGATTGGACGACATGGAATTTATTGGGCAAGAACAGGAACAACTGAAAAGGAAAATAGGGAAGCTGCAATTGAAGTTAACTGTTGAAAGAAGGAAGGTCATGGTAGCAGAGTGTTGTGTGATTCTGTGTGTGGCTGTGAATTTGGTGGGGTTACTGTTGTGTATTGTTAAGTGTGATAGGGTTAGGAAGAATGTGTAG 1425 0.4302 MILKSLSVGGSSEMKIQKMLGDISNTQPYSFTHSIQNLRSEIEEKERETMLLPSNPTDDSSLICPLPQALLERLKNYGQEEVIVLWEELSLEERDLFVKKIKSLDLSRIDRIIRCFLRSRPTSQLFGDEEVQLWKPFRDKLETIMVMLDKRYIDDSNFTWFRDTHKVFDNLSERLTVNVDVLQMWVLISNFKLAYNLLRRPDGTFNRDLAELLDRNVSTNTNPVDGVFSFDVIVDRETNLLTRIYRPAEGEKIAMRALENRYPCAYEDEKRLDGRYFVRVQDRDCHQNPVELDRLKKAHIRDGASIVHLREKEAETQDFIGAVGASGFVKVAMKTKSYGVVKRSAACKSSSSSSIARRHYCACGEEVTLLKSNSVRNPGRIFWRCPNWDKEKNCGYFRWADDEASEQRGRLDDMEFIGQEQEQLKRKIGKLQLKLTVERRKVMVAECCVILCVAVNLVGLLLCIVKCDRVRKNV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi510g00042 474 ProSiteProfiles Zinc finger GRF-type profile. 361 403 IPR010666 GO:0008270
Sebi510g00042 474 PANTHER ZINC ION-BINDING PROTEIN 349 441 - -
Sebi510g00042 474 Pfam GRF zinc finger 360 402 IPR010666 GO:0008270
Sebi510g00042 474 Gene3D alpha/beta hydrolase 165 268 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi510g00042 Sebi-Chr510 746909 749514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi510g00042 182 274 Carbohydrate Esterase AT3G05120 60.215 1.54e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi510g00042 K14493 - gmx:100815161 130.954