Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi510g00016 ATGAGAGCAGAATGGCTATGGCGCAACGTGCACCACCCAGAACTCAGCTCGAAAGACACGAGGATTAGAGGAAATTCTCTTCTGATGTTTAGGGGTAGCGAAATTGTGCGATCTTATGATATAGATCACGATCTTGACAACCATGGTAGGGAGGACGTTTTCTGTCGATTTCTACCACTGAGGGCAGATCTGTCTCGAGGGGGTGAGCAAGTGACCAAGGGGAGTAATGGCTACCTTCACCCCCGGGAGAATGGGAGCGCATTGCGGTGGAAGCCATCGTGTCTGAGTGCAGCGTTTGCAGATGCCCGGGCAGGGAGGACTCCAGTAAGACAACAGGGTGTTCTTCTCGCCATTCAGTTTGATTTTTTTGTGCCCCTGTTTTGCAGAAAGAATAATGGCCAGTTTTTGCCGGAAACTGACCAAACCACCACTGGAAAAAGACTAAGGAAAACTTTAGAGCAATGTGAGAAGGATAAGGAGCGTGTTCTGGTCCATTGCATGTCAGGAAAGAATAGGTCCCCAGCTATTGTGATTGCATACTTGATGAAGTCTAAAGGATGGAGACTTGCACAGAGCTATCAATGGGTAAAGGAACGGAGACCTTCTGTTGAATTAACTGAAGGTGTCTACAAGCAACTGCAGGAGTATGAGCAAAAGCTATATGGATCGGTTGATGGTGGCGGCTCTCTGCTACCTGGTTTCTCACCTACAGCAACTCCATCACTTAGCTTTGGCTTCCCAAAGATCAATGATTCAGCTCCACTTCCTACCTTCAGCAGTGGTGGAACTCCTTCAATTTTCTCGCGAGCACCCTTAAACATTGCTCCTACTGAGTTTACATTTGGAGCTGGTCAGACACAGAAGAGTGTGACTGGAAGCCCATTTAATGCAAATCCACCTAATCCAAATGTCACTGATATCCAAATGGATGGTTCTTGA 939 0.4718 MRAEWLWRNVHHPELSSKDTRIRGNSLLMFRGSEIVRSYDIDHDLDNHGREDVFCRFLPLRADLSRGGEQVTKGSNGYLHPRENGSALRWKPSCLSAAFADARAGRTPVRQQGVLLAIQFDFFVPLFCRKNNGQFLPETDQTTTGKRLRKTLEQCEKDKERVLVHCMSGKNRSPAIVIAYLMKSKGWRLAQSYQWVKERRPSVELTEGVYKQLQEYEQKLYGSVDGGGSLLPGFSPTATPSLSFGFPKINDSAPLPTFSSGGTPSIFSRAPLNIAPTEFTFGAGQTQKSVTGSPFNANPPNPNVTDIQMDGS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi510g00016 312 MobiDBLite consensus disorder prediction 286 312 - -
Sebi510g00016 312 ProSiteProfiles Dual specificity protein phosphatase domain profile. 84 222 IPR020422 GO:0006470|GO:0008138
Sebi510g00016 312 SMART dsp_5 105 219 IPR020422 GO:0006470|GO:0008138
Sebi510g00016 312 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 149 221 IPR029021 -
Sebi510g00016 312 Gene3D Protein tyrosine phosphatase superfamily 134 225 IPR029021 -
Sebi510g00016 312 Pfam Dual specificity phosphatase, catalytic domain 148 219 IPR000340 GO:0008138|GO:0016311
Sebi510g00016 312 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 142 211 IPR000387 GO:0016311|GO:0016791
Sebi510g00016 312 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 150 312 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Sebi510g00016 312 ProSitePatterns Tyrosine specific protein phosphatases active site. 164 174 IPR016130 GO:0016311|GO:0016791
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi510g00016 150 206 Protein tyrosine phosphatase (PTP) family AT2G04550 75.439 2.59e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi510g00016 K04459 - gmx:100808721 278.485