Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi510g00008 ATGATTTCCCACCTCGATCAAAACCATCTCTTCCTTTTCTTCCCTGCTGTATGCAAAAAATCCCTTGCAACACACAACCCATTTGCTGTCTCTCTCAAAGGTTCAACCTTTCGCGATTGTAAGGCTACCCACTTTCTTCAACTTCGTCGACTGTACTGTTTTCAATCATCCAATCCTGTGAAACGGTTATCTCGGAATGCAAGGGTAAAGGTGCAGGATGTGCTGCTAGATTACTTGCATTCAAGCAGGGGATACAGCTTCATGGATTCTGAGTTCATTAGCAAGAACTCACCACATTTCATTCAAAGTTTGGTTTCAGAGTTTCATGAACAAGATGATGATGTTGCAGGGTCATTAAGGAGGTTCCTTAGGTACAACCCCATCAATGAGTTTGAACCTTTTTTTGAGAGTTTGGGGATTAACCCTCATGAGTTGCATTTGTTTCTCCCACGTGGGATGATGTTTTTGTCTGATGATGATGTTTTGCTTGAAAATTTTCATGTTTTGACTAATTATGGGGTCCCAAGAAATAGAATAGGGAAAATTCATAAGGAAGCAAAAGAGGTTTTTGGGTACCCTAGTGGATTGTTGTCATTGAAATTTCAAGCTTATGAAAATTTGGGTTTGAGTAGGTCCAGGGTCATCAAGCTCATTGTTTGTTGCCCTTCACTTTTGATTGGTGAAACAAGCAGTGAATTAGTCACTATTCTTGATTGGTTGAAGAAAATTGGTATTGAACATGATTGGATTGGGAATTACTTGTCTTGTTCAAAGACATATAACTTCAAAAAAATGCTTGATGCTATGAAATTTCTTCATAAAGTGGGCTATTCTGAGAAACAGATGCACAATTTGTTCATGGAAAATCCTGCATTATTGTTGGAAGGTCTTGAGAAGAAGGTGTATGTATTTTTGGGTCTATCACTTAAGTTAGGTCTCAAGAAGAATGTGATTTATTCTTCTTTTTTAGAATATCCCCATATCTTGTCAAGTAAGTCTGTAAAGAATCTTTTGGGAGTGGTTGGTTTTTTGTATTATATTGGAATGGGAACAGATGACATTGCACACATTTTGTCTAATCACATGCATCACCTGAGCTCTCATCCCTTGAAAGGCCCTAAAGCTGTTTGTTTTCAGTTAAAAATTAGAAAAGCTGAGTTATGCCAAATCATAAAGGATGATCCACTGAAGCTGATTATTTTGGCTTCAAAACTGAAACAGAATAGTTCTGTACTGTTATCTTGTGATGAATCAAGTAAACATTTGGAGAAAACAACATTCTTGCGGAAACTTGGATATGCAGAGAACTCTGAGGAGATGGCAAAAGCAGTAAAAAGGTTCCGAGGGAGAGGTGATCAATTACAGGAGAGGTTTGATTGCCTGGTTGAAGCTGGTTTGGACTATAACATTGCAATCAAAATGATACAACATGCTCCTATGATTCTAAACCAGAACAAAGTTGTAATTGAAAAGAAGATTGATTTCTTAAGAAACATTTTAGGTTATCCATTAGAATGTTTAGTTGGATTTCCAGCATACTTGTGCTATAATTTGGAGAGAATTATGCTCAGATTTTCAATGTATGCTTGGTTGAAGGAAAGGAAAGCAGTAAATCCTATGTTGACCTTGAGCTCTATCCTTGTATCATCTGAGGAACGGTTTATAAAATACTTTGTGAATGTGCATCCTGAAGGTCCAATCATCTGGAAAGGTCTAAAGAGTTTATTGCAAAAAGATAAGAGCCAACACATTCTTTGTATTTAG 1764 0.3707 MISHLDQNHLFLFFPAVCKKSLATHNPFAVSLKGSTFRDCKATHFLQLRRLYCFQSSNPVKRLSRNARVKVQDVLLDYLHSSRGYSFMDSEFISKNSPHFIQSLVSEFHEQDDDVAGSLRRFLRYNPINEFEPFFESLGINPHELHLFLPRGMMFLSDDDVLLENFHVLTNYGVPRNRIGKIHKEAKEVFGYPSGLLSLKFQAYENLGLSRSRVIKLIVCCPSLLIGETSSELVTILDWLKKIGIEHDWIGNYLSCSKTYNFKKMLDAMKFLHKVGYSEKQMHNLFMENPALLLEGLEKKVYVFLGLSLKLGLKKNVIYSSFLEYPHILSSKSVKNLLGVVGFLYYIGMGTDDIAHILSNHMHHLSSHPLKGPKAVCFQLKIRKAELCQIIKDDPLKLIILASKLKQNSSVLLSCDESSKHLEKTTFLRKLGYAENSEEMAKAVKRFRGRGDQLQERFDCLVEAGLDYNIAIKMIQHAPMILNQNKVVIEKKIDFLRNILGYPLECLVGFPAYLCYNLERIMLRFSMYAWLKERKAVNPMLTLSSILVSSEERFIKYFVNVHPEGPIIWKGLKSLLQKDKSQHILCI 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi510g00008 587 SMART mt_12 437 467 IPR003690 GO:0003690|GO:0006355
Sebi510g00008 587 SMART mt_12 320 350 IPR003690 GO:0003690|GO:0006355
Sebi510g00008 587 SMART mt_12 504 535 IPR003690 GO:0003690|GO:0006355
Sebi510g00008 587 SMART mt_12 215 246 IPR003690 GO:0003690|GO:0006355
Sebi510g00008 587 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Sebi510g00008 587 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Sebi510g00008 587 Pfam mTERF 269 434 IPR003690 GO:0003690|GO:0006355
Sebi510g00008 587 Pfam mTERF 420 554 IPR003690 GO:0003690|GO:0006355
Sebi510g00008 587 Gene3D Transcription termination factor 3, mitochondrial 125 234 IPR038538 -
Sebi510g00008 587 Gene3D Transcription termination factor 3, mitochondrial 302 565 IPR038538 -
Sebi510g00008 587 PANTHER CGI-12 PROTEIN-RELATED 75 301 IPR003690 GO:0003690|GO:0006355
Sebi510g00008 587 FunFam mTERF family protein 108 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi510g00008 Sebi-Chr510 109591 111354 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi510g00008 mTERF 9.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi510g00008 - - aprc:113846643 893.264