Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi510g00007 ATGCTTCAAAAACCTGTCTCAAGGAGGCAAAACCCGTCTTCTCTTTCTCTCAAAGTTCGAAGCTTTCGCGGTTCGGAGCCTCCCCATGTTCCTTCTTTTTCTCCTGTGAAACCCCTTCGTGTGCCTCGGCACGTGAGAACCGAAGCACAGGTTGTGCTTATGGATTACCTCCATTCAACTCGTGGCTACAGCTTCTTGGATGCCGAGTACATCAGCAAAAACTCGCCGCGCTTCGTTGAATCTTTGGTTTCAAAAATCGGTGGTGAAGAAGGTGATGTTTCTCGATCATTGAGGAAGCTCCTGAGGTATAACCCTGTTAACGAGTTTGAACCATTTTTTGAGAGTTTAGGGATTAGCCAATCTGAGTTACCTTTGGTTCTCCCTCCTGATATGATTTTTTTGAGTGATGATCATGTTTTGCTTGATTGTTTTCATGCTCTTTGTAATTATGGGGTCCCTAGAAACAGAATGGGAAAAATTTATAAGCAAGCAAAAGAGATTTTTTGGTATGATAGTGGATTGTTGCTGTCAAAATTTCAAGCTTTTGAAAATTTGGGTTTGAGTAAATCAGCAGTCATCAAGCTTGTTGTTTGTTGCCCTTCACTTTTGGTTGGTGCTATGGATTGTGAGTTTGTTGATGTTATTGGTTGGTTGAAAAAAATTGGGGCTGAAAGTGATTGGATTATGAATTGCATGTCTTATTCAAGAACTTATAGTTGGAAAAAAATGCTTGAAACCATTCAATTTCTTCATAAAGTGGGCTATTCTGAGAAACATATGCACAATTTGTTTAAGGAAAATCCTAGATTGTTATTAGAAGGTTTTGGGAAGAAGCTGTTCTTATTTTTGGGTCGATCACTTAAGTTGGGTCTCGAGATGAATGTGATTTGTTCTTATTTCATAAAGTATCCCTATATAATGTCAAGTAAGAGTGCTAAAAATCTCATAAGGGTGATTGGTTTTCTGTATATTATTGGAATGGGAAAAGATGACATTGCAAACATTTTGTCTAACCACATGCACCTCCTGTGCAAACATTCGTGGAAAGGTCATAAAACTGTTTGTGAGGAGTTAAACATTGGAAAAGCTGATTTATGCCAAATCATAAAGGATGATCCATTAAAGCTAATTAGTTTGGCTTCAAAACTGGAACAGAAGAGCAATGAACAGGTATTCTGTCATGACCCACGAAATTATTTGGAAAAAACTGCTTTCTTGCTGAAACTGGGGTATACTGAGAACTCTGAAGAGATGGCAAAAGCATTAAAAATGTTTCGAGGGAGAGGTGATCAATTACAAGAGAGATTTGATTGCCTAGTAGAAGCTGGTTTGGATTACAACAGTGTAATTGAAATGATAAAACGAGCTCCTATGATTCTAAACCAGAAAAGAAGTATAATTCAAAAGAAGATTGATTTTGTAAAAAAATTAGATTACCCAGTAGAATGTCTTGTGAGATTCCCATCATACTTTTGTCATGATTTGGAGAAAATTATTGAAAGATTTTCAATGTATGAGTGGCTGAAGGAGAGGAATGCGGTTAATCCTGATTTAACCTTGAGCACCATAGTTTCCTCTAATGATAAACGGTTTGTAAAATACTTTGTGAATATGCATCCTCAAGGTCCAACCATCTGGAATAGTCTAAAAAGGTTATCAAACAAAGATAAGAAATAA 1677 0.3703 MLQKPVSRRQNPSSLSLKVRSFRGSEPPHVPSFSPVKPLRVPRHVRTEAQVVLMDYLHSTRGYSFLDAEYISKNSPRFVESLVSKIGGEEGDVSRSLRKLLRYNPVNEFEPFFESLGISQSELPLVLPPDMIFLSDDHVLLDCFHALCNYGVPRNRMGKIYKQAKEIFWYDSGLLLSKFQAFENLGLSKSAVIKLVVCCPSLLVGAMDCEFVDVIGWLKKIGAESDWIMNCMSYSRTYSWKKMLETIQFLHKVGYSEKHMHNLFKENPRLLLEGFGKKLFLFLGRSLKLGLEMNVICSYFIKYPYIMSSKSAKNLIRVIGFLYIIGMGKDDIANILSNHMHLLCKHSWKGHKTVCEELNIGKADLCQIIKDDPLKLISLASKLEQKSNEQVFCHDPRNYLEKTAFLLKLGYTENSEEMAKALKMFRGRGDQLQERFDCLVEAGLDYNSVIEMIKRAPMILNQKRSIIQKKIDFVKKLDYPVECLVRFPSYFCHDLEKIIERFSMYEWLKERNAVNPDLTLSTIVSSNDKRFVKYFVNMHPQGPTIWNSLKRLSNKDKK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi510g00007 558 Gene3D Transcription termination factor 3, mitochondrial 71 279 IPR038538 -
Sebi510g00007 558 Gene3D Transcription termination factor 3, mitochondrial 280 547 IPR038538 -
Sebi510g00007 558 PANTHER CGI-12 PROTEIN-RELATED 52 205 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 SMART mt_12 193 224 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 SMART mt_12 481 514 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 SMART mt_12 415 445 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 SMART mt_12 382 412 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 SMART mt_12 450 480 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 Pfam mTERF 108 207 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 Pfam mTERF 425 531 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 Pfam mTERF 247 477 IPR003690 GO:0003690|GO:0006355
Sebi510g00007 558 FunFam mTERF family protein 87 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi510g00007 Sebi-Chr510 104047 105723 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi510g00007 mTERF 1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi510g00007 - - gmx:100803162 786.563