Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00157 ATGAAGCCCTTTTCTGTCATGTACATGTTAATGTTACCTGCTGCATTCTGGCCTATATGCCTTCACTTCCTATTTATTTTCAACTCTCTCTCTCTATGGAACGCAACTGCCTCTTCGGCTTTCGGAAATGAGACCGACCATTTGGCTTTGCTGAAATTGAAGGAATCAATATCCAATGACCCATTTGGAATTCTACATTCTTGGAATGCTTCTACGCATTTCTGCGAGTGGCATGGAGTCACATGCATGCACCAAAGAGTAACAGAGTTGAACCTACCAGCATATCGGTTGCATGGATCCTTGTCTCCTCATGTTGGTAATCTCTCTTTTCTAAGATACCTGAATCTTGAAAACAATAGTTTCTATGGAAAGATCCCACAAGAATTGGGTCGGTTGTTACAGTTGCAGCAACTCTCTCTCACCAATAACTCCTTCACAGGGGAGATTCCTACAAACTTGTCAAGTTGCTCTCATCTCAAAGTCTTATTTTTAGATGGAAATCATCTGACTGGCAAAATACCAATTGGAATTGGCTCTCTTCGGAAGCTTCAACTATTGGCGCTTCCAAGCAACAATTTAACAGGGGGACTCCCATCATTTATAGGGAATCTTTCATCCCTAATTGGTCTTTCGGTGGCTTATAATAACTTAGAGGGAGATATTCCACAACAAATATGCCGCCTCAAAAATCTGACAGTTATAAAACTGTTTATGAATAAATTCTATGGTACATTTCCTTCTTGTCTTTATAATATGTCATCTCTTACTTACATCTCAGCTGCAAGTAATCACTTTTATGGCACTCTTCCACCCAACATGTTCAACACACTCTCCAATCTCCAATTTTTTTCAATTGGCGGGAATCAATTCTCAGGCCCAATCCCTACTTCCATGGCAAATGTGTCCACCTTTACAAAACTTGATATCAGTCGAAATCATTTTGTCGGACGAGTTCCAAGTCTAGAGAAGCTACAAGATCTTCAGTGGTTAAATTTGGAACTGAATCATCTGGGTGGCAATACAACTAAGGATTTGGAGTTTTTAAAATCATTGACAAACTGCAGTAAGTTACTAATGATCTCTATATCCTATAATAATTTTGGAGGTACTTTACCGAATTTTGTGGGTAATTTGTCCACTCAAATAAGCCAACTACATCTTGGGGGTAACAAGATATCAGGAAAAATTCCCGTGGAATTGGGAAATCTAATTAGCTTAACTATCTTGACCATGGAAATAAATCATTTTGAGGGGACTATCCCAACTGATTTTTCCAAGTTTCAAAATATGCAAATATTAGATTTGAGCCAAAACAAACTTTCAGGACACATACCAGCCTTCATAGGAAATCTCAGTCAATTGTTTTATCTGGATTTATCAAAGAATATGTTAGAAGAAAATATTCCTCCAAGCATAGGGCACTGCCAAAAGTTACAACACCTAAACCTTTCGCAAAACAACCTTAAAGGAACCATACCCTCTGAGGTTTTTAGCCTTTCCTCATTAACAAACTTATTGGACTTGTCACAAAACTCTTTGAGTGGCACTCTCCCTTATGAAGTGGGCAGTCTAATAAATATCAATTGGATGGATCTCTCTGAGAATCAACTGTCTGGTAACCTTCCTGGAACCATTGGAGAATGCATGAGCTTGGAGTACCTTTATTTGCAAGGAAATTCCTTCCATGGAATCATGCCATCCTCCTTGGCTTCACTCAAAGGCCTTCGACGCTTAGACCTGTCGCGAAACCGCTTGTCTGGATCAATTCCTAAAGGTCTACAGAACATTTCTTTCCTAGAATACTTGAATGTTTCTTTTAACATGTTGGATGGTGAAGTACCAACAGAAGGTGTCTTTCGAAATGCAAGTGCCTTAACGGTGATTGGAAACAACAACCTTTGTGGAGGTATTTCAAAGTTGCATTTACCTCCATGCCCTGTCAAAGGTATGAAACCTGCCAAACACCATAATTTCAAGTTGATAGCAGTCATAGTTAGTGTGGTTGTTGCTTTTCTTCTCATAATATTATGTATTCTAACAATCTACTGGATGAGGAAAAGAAACAAGAAGCCATCTTCTGATTCACCAACAATTGATCATCTTGCTAAGGTTTCATATCAAAACCTACACAATGGAACTGATGGGTTCTCAACTAGAAACTTGATAGGATCTGGAAATTTTGGCACTGTCTACAAAGGAACTCTTGAGTCAGAAGATAGAGTTGTTGCCATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCACACAAGAGTTTTATTGCTGAATGTGATGCACTCAAAAATATTAGACATCGAAATCTGGTTAAGATTTTGACATGTTGTTCCAGTACAGATTACAAAGGTCAAGAATTTAAAGCCCTAGTTTTTGAGTACATGAACAATGGAAGCTTAGAAAGTTGGTTGCATCCCACAATAGAAAATATAGATCAGCTCAAATCATTGAACCTTGAGCAAAGGTTTAGTATTATTTCCAATGTTGCTTTAGCAGTTCATTATCTTCACTATGAATGTGAGGAGCCTGTCATTCATTGTGATTTAAAGCCTAGCAACGTTCTTCTTGATGAATGCATGGTAGCACATGTGGGTGATTTTGGCTTAGCAAGATTTCTCTCAAGTGTTGGAGTCTCTCTCAAGCAAAGTAGCACAATTGGAATAAAGGGGACTATTGGTTATGCGCCTCCAGAGTATGGATTGGGTTCTGAGGTGTCAACTGAAGGTGACATGTATAGCTTCGGAATTCTGGTTTTAGAAATGTTAACAGGAAAGAGACCCACAGATGAAATGTTTAAAGATGGTCTCAATCTCCATAATTATGTTAAAAGTTCCATTTCAAATCACCTTTTGCAGATTGTGGATCCGACTATTCTCCCCATTAATGGATTCAAACAAGTCAATGGCATGCATCCTAATGCAGAGAAATGTTTACTTTCACTTTTTAGGATTGCACTTTCTTGTTCAGTTGAATCACCAAGAGAAAGAATGAGTATGGTTGATGTCACTAGGGAGCTTAATCTTATCAAAAGCTTCTTTCCTCACCGGGTTTAA 3063 0.3849 MKPFSVMYMLMLPAAFWPICLHFLFIFNSLSLWNATASSAFGNETDHLALLKLKESISNDPFGILHSWNASTHFCEWHGVTCMHQRVTELNLPAYRLHGSLSPHVGNLSFLRYLNLENNSFYGKIPQELGRLLQLQQLSLTNNSFTGEIPTNLSSCSHLKVLFLDGNHLTGKIPIGIGSLRKLQLLALPSNNLTGGLPSFIGNLSSLIGLSVAYNNLEGDIPQQICRLKNLTVIKLFMNKFYGTFPSCLYNMSSLTYISAASNHFYGTLPPNMFNTLSNLQFFSIGGNQFSGPIPTSMANVSTFTKLDISRNHFVGRVPSLEKLQDLQWLNLELNHLGGNTTKDLEFLKSLTNCSKLLMISISYNNFGGTLPNFVGNLSTQISQLHLGGNKISGKIPVELGNLISLTILTMEINHFEGTIPTDFSKFQNMQILDLSQNKLSGHIPAFIGNLSQLFYLDLSKNMLEENIPPSIGHCQKLQHLNLSQNNLKGTIPSEVFSLSSLTNLLDLSQNSLSGTLPYEVGSLININWMDLSENQLSGNLPGTIGECMSLEYLYLQGNSFHGIMPSSLASLKGLRRLDLSRNRLSGSIPKGLQNISFLEYLNVSFNMLDGEVPTEGVFRNASALTVIGNNNLCGGISKLHLPPCPVKGMKPAKHHNFKLIAVIVSVVVAFLLIILCILTIYWMRKRNKKPSSDSPTIDHLAKVSYQNLHNGTDGFSTRNLIGSGNFGTVYKGTLESEDRVVAIKVLNLQKKGAHKSFIAECDALKNIRHRNLVKILTCCSSTDYKGQEFKALVFEYMNNGSLESWLHPTIENIDQLKSLNLEQRFSIISNVALAVHYLHYECEEPVIHCDLKPSNVLLDECMVAHVGDFGLARFLSSVGVSLKQSSTIGIKGTIGYAPPEYGLGSEVSTEGDMYSFGILVLEMLTGKRPTDEMFKDGLNLHNYVKSSISNHLLQIVDPTILPINGFKQVNGMHPNAEKCLLSLFRIALSCSVESPRERMSMVDVTRELNLIKSFFPHRV 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00157 1020 ProSiteProfiles Leucine-rich repeat profile. 477 499 IPR001611 GO:0005515
Sebi50g00157 1020 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 798 1019 - -
Sebi50g00157 1020 FunFam LRR receptor-like serine/threonine-protein kinase EFR 348 651 - -
Sebi50g00157 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Sebi50g00157 1020 Gene3D Transferase(Phosphotransferase) domain 1 798 1016 - -
Sebi50g00157 1020 ProSiteProfiles Protein kinase domain profile. 716 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi50g00157 1020 Gene3D Ribonuclease Inhibitor 42 321 IPR032675 -
Sebi50g00157 1020 Gene3D Ribonuclease Inhibitor 322 651 IPR032675 -
Sebi50g00157 1020 SMART LRR_typ_2 427 449 IPR003591 -
Sebi50g00157 1020 SMART LRR_typ_2 476 499 IPR003591 -
Sebi50g00157 1020 SMART LRR_typ_2 596 621 IPR003591 -
Sebi50g00157 1020 SMART LRR_typ_2 204 228 IPR003591 -
Sebi50g00157 1020 SMART LRR_typ_2 252 276 IPR003591 -
Sebi50g00157 1020 SMART LRR_typ_2 108 132 IPR003591 -
Sebi50g00157 1020 SMART LRR_typ_2 550 571 IPR003591 -
Sebi50g00157 1020 SMART LRR_typ_2 451 475 IPR003591 -
Sebi50g00157 1020 SMART LRR_typ_2 572 595 IPR003591 -
Sebi50g00157 1020 SUPERFAMILY L domain-like 381 635 - -
Sebi50g00157 1020 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 80 347 - -
Sebi50g00157 1020 Pfam Protein kinase domain 718 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi50g00157 1020 CDD STKc_IRAK 722 1012 - -
Sebi50g00157 1020 SUPERFAMILY L domain-like 43 337 - -
Sebi50g00157 1020 SUPERFAMILY Protein kinase-like (PK-like) 689 1010 IPR011009 -
Sebi50g00157 1020 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Sebi50g00157 1020 Pfam Leucine rich repeat 405 464 IPR001611 GO:0005515
Sebi50g00157 1020 SMART serkin_6 716 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi50g00157 1020 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Sebi50g00157 1020 Pfam Leucine rich repeat N-terminal domain 44 82 IPR013210 -
Sebi50g00157 1020 PANTHER OS04G0122200 PROTEIN 227 1012 - -
Sebi50g00157 1020 FunFam LRR receptor-like serine/threonine-protein kinase EFR 686 797 - -
Sebi50g00157 1020 Gene3D Phosphorylase Kinase; domain 1 697 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00157 Sebi-Chr50 2418247 2421436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00157 40 1016 Receptor kinase-like Gene Family AT3G47570 46.131 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi50g00157 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00157 - - gmx:100792724 1400.19