Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00147 ATGGAGTGCACAAGAACAGGTCAATGGTTAAACCTTCTACTCTGTGTACTTCTATTGCTGAAGGCAGAAGCTTCTTATGTACCAATCACTTATCTCCAGAGTGCAGTAACAAAAGGAGCCGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGATAAGGGATTTGGATCAGGGAATAACAGTTGGTTAGTTCAATTTGAGGGAGGGGGATGGTGCAACAATGTCACTAGTTGCCTTGCTCGCAAGAATGGTCGTTTAGGTTCATCTAAGCAAATGGGCAAGCAAATTGCCTTTTCAGGAATTTTAAATAACCAGAGAATGTTTAATCCAGATTTTTACAATTGGAACAGAATCAAGGTTAGATATTGTGATGGATCATCATTTACTGGTGATGTGGAAGCAGTCAACCCAGTAACCAAGTTACACTTCAGAGGAGCAAGGATTTTTAATGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTGACTTCAGTACTGCATTGTGATCGTTTTCGAGCTCTATTACCATCAGGAGCTAAAGTGAAGTGCCTTTCAGATGCTGGTTACTTTATCAATGCAAGGGATGTCTCTGGAGCACTGCACATTGAACAGTACTTCAGTCAAGTTGTTGCCACACATGGCTCTGCAAGGAGTTTGGCTCAATCATGCACTTCAAGACTAAGTCCAGGGCTGTGCTTTTTCCCACAACATTTGGTATCACAAATCACTACACCAATCTTCTTTGTAAATGCGGCATACGACTCATGGCAGATCAAGAACGTTTTGGCACCGGGTGTTGCTGATCCTCATGGCCATTGGCATAACTGCAAGTTAGATATAAACAACTGCTCACCTTATCAACTCGATCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCTTTGACTGTGCTGCGCAACTCTCCATCTAAAGGACTTTTTATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAGGAGACATGGTTCAGAAGTGACTCTCCAATGCTGGGCAAGACAACAATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGCCCTTCCATCAGATAGATTGTCCTTACCCTTGCAATCCCACTTGTCACAACCGCGTTTTTGAACCCCCACAAGACCACCCAGGAAAAAATGTGACCACCAAAGGAACGTCAGGTGCATCAGCTACAAAGCTCAGTTTTCCAAAACTATCAAACAAGGAACAATGGATTGAGCTGTTGTGCATTAGACATGGGATCAGTGGGCTTCTATTAACGTTGGTCATTCTGGTCATCCTATAA 1350 0.4274 MECTRTGQWLNLLLCVLLLLKAEASYVPITYLQSAVTKGAVCLDGSPPAYHFDKGFGSGNNSWLVQFEGGGWCNNVTSCLARKNGRLGSSKQMGKQIAFSGILNNQRMFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFNAVIEDLLAKGMKNARNAIISGCSAGGLTSVLHCDRFRALLPSGAKVKCLSDAGYFINARDVSGALHIEQYFSQVVATHGSARSLAQSCTSRLSPGLCFFPQHLVSQITTPIFFVNAAYDSWQIKNVLAPGVADPHGHWHNCKLDINNCSPYQLDLMQGFRTEFLRALTVLRNSPSKGLFIDSCYAHCQTEMQETWFRSDSPMLGKTTIAKAVADWFYERRPFHQIDCPYPCNPTCHNRVFEPPQDHPGKNVTTKGTSGASATKLSFPKLSNKEQWIELLCIRHGISGLLLTLVILVIL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00147 449 PANTHER NOTUM-RELATED 13 388 IPR004963 GO:0016787
Sebi50g00147 449 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00147 Sebi-Chr50 2288850 2293750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00147 5 398 Carbohydrate Esterase AT4G19420 59.441 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00147 K19882 - gmx:100818146 791.956