Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00124 ATGTACCAGCTTTACCTTCACGAAATCGTCACTGAGTTGCACGAAGAGTTTCCAGAATCTTCCTTTCTGGCCTTCAATTTTCGCGACGGCGAGAAGCGTAGCAACTTCGCGGAGATCCTATGCGAGTACGATGTTATGGTTATGGATTATCCGAAGCAGTACGAGGGTTGCCCCCTTCTGACACTGTCTTTGGTTCAGCATTTTTCTTCGCGTTTGCGAGAGTTGGCTTTCACTTCGGAATCACCAAAACGTGATTTTGTTCCACTGACCCTTGAAATTGTGCATAGAGAAGCACCTAAGGGTTTGTTGCAGCTCTTGTCACCCTTGATCCTTTGCCTTCTCAGCTTCGTTATATTCAGTATGTGGCAAGGAGGAACATTGCCCCTGAGTGGCCCCCACCTGAGCGGGCTCTGTCTCTGGATTGTGTCATTCTCAGAGGAATTCCTAGTTTTGATTCCCAGAATGGATGCAGGCCCATGTTCAGGATTTTTGGGAGGAATCTGCTCACAAAGGGGGGCTTTCCACCCAGATGATTTATTCCATGCACAAGAAGAAGATCTTGAGGCATTACCGCCAGATTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGAGATGTGGTGTTGGAGTGTGTCCATTTGGATTTGGATCCAGAAAGGGAAGTTATGATGTTTCGTGTGATGTTTAACACTGCATTTATTCGATCCAACATACTGATGCTGAACACTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGGTATCCAAAAGGATTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAACCATAAGTCCCCCAAGGGCTCCAACAACTATTTTAAATGGTGAGGAGAAAGGTGGATTGCCCATTGAAGCATTTTCAAGAGTTCAAGAACTTTTTAGTGGTGTAGAATGGGTTGACAGTGGTGATGCTGCTGCTTGGCTGCTTAAACAACTTACAGTCTTAAATGATGCAAAAGAGTTTTCAAGGTTGCAAGGTAAAGGAAGCTGGTATTCATCACCTGCTGACTCTGACGATGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATGAGGCCTTTGATGATAATGGTGGAAATAACACAAATCTCACTTCAAGAACACCTGATCAGTCATTAACTGATAATGTTTCACCACCTCATCATGCTCCAAGTTTTTCCACTAGTAATGCTACTAGTCCACCTCCACCTCCCCCACCTCCCCCGAGTCACAATGCTAGCAATATTTCATTGCTTTCACCTCCACCACCACCACCACCACCACCCCCTCCTACTATAGGTCATAGTGCCAATAGTGCTCCTAGTCCTCCTCCTCCTCCACCTCCACCTCCTCCAACTCCTGTAACAACAGGTTCAGCCCCGCCACCACCACCTCCTCCTCCTCCAGGACCTGTACGAACAAGTTCAGCCCCACCACCCCCACCTCCACCACCTCCAGGACCTGTAAGAACAGGTTCTGTAAGAACAGGTTCAGCCCCCCCACCACCACCTCCACCTCCTCCAGGACCTGTACGAACAAGTTCAGTCCCACCACCCCCACCCCCACCTCCTCCAGGTTCTGTAAGAACAGGTTCAGCCCCCCCACCACCACCTCCACCTCCAGGTCCTGCACGAACAGGTTCAGCTCCACCACCACCACCTCCACCTCCTCCCGGTCCTGCACGAACAGGTTTAGCTCCACCCCCACCCCCTCCCCCTCCTCCAGGTCCTATACGAACAGGTCCAGCCATGCCACCTCCACCTCCACCTCCTCCAGGTCCTACTCGAACAGGTTCAGTCCCACCACCTCCACCTCCTCCAGGTGTACGGACAGGTTCAACTCCCCCATCTCCCCCACCAGCTCCTCCAGGATCTGTGCGATTGGGTTCAGCTCCACCGGCACCAAAGCCTCCAAGCGCTCCTCCTCCTCCACCTGGTCGTGGTTTATCATCAGTGCCACCTCCACCTACTGCAGCCAGGGCCCCTGGTGTTCCACCACCACCAGGCAAAGCTTCAGCAACAACAAATGTTGGAAGAGGTCGTGGTACTGCTGGGGTTGCTAACGCTCCTAAGAAAACTTTGTTGAAGCCCCTTCATTGGGTGAAAGTTGCTCGAGCAACAAAAGGGAGTCTATGGGCTGATTCACAGAAACAAGACAGTGAATCAAGGGCCCCTGAAATAGATATATCAGAACTTGAGAGCTTGTTTTCAGCAGCATCTGCTTCTGATGGGAGCAGTACTAAAGGGGGAGGTCGGCGTGGTACTAATATTAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAATGCAGTTCTGGCATTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAAAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATGTTGAAGAATTATTCAGGGAACAAGGAAATGCTTGGAAGGTGTGAGCAGTTTTTTATGGAGCTGATGAAGGTTCCACGAGTAGAATCTAAATTAAGGGTGTTTGCTTTTAAAATCACCTTTTCTGCTCAGGTGAGCGATTTAAGGTTGAATTTGAATACAATCAATGATGCAGCCAGAGAGGTGAAAGAATCTGTAAAATTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTGAATCAGGGAACGGCACGGGGATCAGCAGTAGGGTTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCTAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAATTGCCAGAATTGCTAGATTTTGACAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATCCAACTAAAAGCATTAGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTGGAGAAAGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTACTATATCTTTAGGATTTCGCAAGGTGTTGAAGAATTTCTTGATATTTGCCGAAGCTGATGTGAGGTCACTTATATCGTTGTATTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCGCAGTACTTTGGGGAGGATCCAGCTAGGTGCCCCTTTGAACAAGTGACACAAATACTTGTTGTCTTTGTTAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCAAGCAGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCTTGAAGGAGAAGACGGCAAATAACATGCATTCCAAAAGAGATATTGTTCGGTAG 3309 0.4651 MYQLYLHEIVTELHEEFPESSFLAFNFRDGEKRSNFAEILCEYDVMVMDYPKQYEGCPLLTLSLVQHFSSRLRELAFTSESPKRDFVPLTLEIVHREAPKGLLQLLSPLILCLLSFVIFSMWQGGTLPLSGPHLSGLCLWIVSFSEEFLVLIPRMDAGPCSGFLGGICSQRGAFHPDDLFHAQEEDLEALPPDCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVETISPPRAPTTILNGEEKGGLPIEAFSRVQELFSGVEWVDSGDAAAWLLKQLTVLNDAKEFSRLQGKGSWYSSPADSDDENNESSTADSSDEAFDDNGGNNTNLTSRTPDQSLTDNVSPPHHAPSFSTSNATSPPPPPPPPPSHNASNISLLSPPPPPPPPPPPTIGHSANSAPSPPPPPPPPPPTPVTTGSAPPPPPPPPPGPVRTSSAPPPPPPPPPGPVRTGSVRTGSAPPPPPPPPPGPVRTSSVPPPPPPPPPGSVRTGSAPPPPPPPPGPARTGSAPPPPPPPPPGPARTGLAPPPPPPPPPGPIRTGPAMPPPPPPPPGPTRTGSVPPPPPPPGVRTGSTPPSPPPAPPGSVRLGSAPPAPKPPSAPPPPPGRGLSSVPPPPTAARAPGVPPPPGKASATTNVGRGRGTAGVANAPKKTLLKPLHWVKVARATKGSLWADSQKQDSESRAPEIDISELESLFSAASASDGSSTKGGGRRGTNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYSGNKEMLGRCEQFFMELMKVPRVESKLRVFAFKITFSAQVSDLRLNLNTINDAAREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKLPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGTISLGFRKVLKNFLIFAEADVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKEKTANNMHSKRDIVR 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00124 1102 MobiDBLite consensus disorder prediction 501 673 - -
Sebi50g00124 1102 ProSiteProfiles Formin homology-2 (FH2) domain profile. 689 1089 IPR015425 -
Sebi50g00124 1102 MobiDBLite consensus disorder prediction 362 400 - -
Sebi50g00124 1102 MobiDBLite consensus disorder prediction 337 694 - -
Sebi50g00124 1102 SUPERFAMILY Formin homology 2 domain (FH2 domain) 764 1093 - -
Sebi50g00124 1102 Pfam Formin Homology 2 Domain 694 1064 IPR015425 -
Sebi50g00124 1102 PANTHER FORMIN-J 2 109 - -
Sebi50g00124 1102 Coils Coil 970 997 - -
Sebi50g00124 1102 MobiDBLite consensus disorder prediction 401 494 - -
Sebi50g00124 1102 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 192 271 IPR035892 -
Sebi50g00124 1102 Pfam C2 domain of PTEN tumour-suppressor protein 193 269 IPR014020 -
Sebi50g00124 1102 MobiDBLite consensus disorder prediction 1070 1102 - -
Sebi50g00124 1102 MobiDBLite consensus disorder prediction 337 351 - -
Sebi50g00124 1102 ProSiteProfiles C2 tensin-type domain profile. 139 271 IPR014020 -
Sebi50g00124 1102 FunFam Formin-like protein 689 1075 - -
Sebi50g00124 1102 Coils Coil 1064 1089 - -
Sebi50g00124 1102 Gene3D Formin, FH2 domain 690 1075 IPR042201 -
Sebi50g00124 1102 MobiDBLite consensus disorder prediction 742 762 - -
Sebi50g00124 1102 Gene3D - 163 274 - -
Sebi50g00124 1102 SMART it6_source 405 1102 IPR015425 -
Sebi50g00124 1102 SMART PTEN_C2_2 144 270 IPR014020 -
Sebi50g00124 1102 MobiDBLite consensus disorder prediction 742 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00124 Sebi-Chr50 1875672 1886016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00124 1 366 FH2 protein (formin) Gene Family AT1G31810 53.883 1.42e-123 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00124 - - gmx:100781274 763.066