Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00110 ATGGGTGTTAACCTGACTCCAGGGGCGATAACAACCATATGCAATGTCCATTTATTTTCGGAGAAGTTGAAGCCGGTGATGCAAGTTATTGACTTGAAGCCAGTGCAATTGCAAGATGATAACTCCACAGAGAGGTATTTACTTGTCATCTCTGATGGTTCGCATTATCATTATGGGATGCTCGCCATGATGAAGAACGAGTTGGTCCGTTCTGGAAGGTTGCAGAAAGGTTCTATTGTTAGGTTCACTCAACTCGTCTACAATGTTGGCGAGCATTGCAACATAGTTTACATCGCCGAGCTGGATGTTATATTGGACAAATATGACTTGATTGGAGACCCAGAGCCAGCACCAAAAAATACTACAGAAGCTGATAACATATTTTCAAAGCTAACAAATGTGAACGGAGAAAACTGTTGTTTGTGTTTGGAAATGTTAAAGCAAACGCATGCTAAGTGTGAGAAGCTTCTTGCGGAAGTTCATGAAGCTCGTCGTGAGAATGTAGAAATCAAGCAAGCTATTCAAGATGTTAAGGAGAAAATGCAGCTTGGGTTTTTAGAAATAAGGCAATTTATTCATGATTATTTTCCAAAACACATTTAA 603 0.398 MGVNLTPGAITTICNVHLFSEKLKPVMQVIDLKPVQLQDDNSTERYLLVISDGSHYHYGMLAMMKNELVRSGRLQKGSIVRFTQLVYNVGEHCNIVYIAELDVILDKYDLIGDPEPAPKNTTEADNIFSKLTNVNGENCCLCLEMLKQTHAKCEKLLAEVHEARRENVEIKQAIQDVKEKMQLGFLEIRQFIHDYFPKHI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00110 200 Coils Coil 146 180 - -
Sebi50g00110 200 Gene3D - 3 117 IPR012340 -
Sebi50g00110 200 FunFam Replication protein A subunit 4 118 - -
Sebi50g00110 200 Pfam Replication factor-A protein 1, N-terminal domain 5 104 IPR007199 GO:0003677|GO:0005634|GO:0006260
Sebi50g00110 200 SUPERFAMILY Nucleic acid-binding proteins 1 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00110 Sebi-Chr50 1745310 1747188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00110 1 119 Core DNA Replication Machinery Family AT4G19130 44.167 7.29e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00110 K07466 - lja:Lj2g3v1548470.1 132.88