Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00094 ATGGAGAGGTACAAGTTAATTAAGGAAGTCGGTGATGGAACGTTTGGGAGTGTTTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCGATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTGAAGTCATTACGAAAAATGAACCACCCAAATATTGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGTAACCTATACCAACTTATGAAAGATAGGGAAAAGCTGTTTTCTGAAGGTGAAATTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCACCAACGTGGATACTTCCATCGTGACCTGAAGCCTGAAAACTTACTGGTTACTAAGGATATTATCAAAATTGCTGATTTTGGCCTAGCCCGAGAGATCAGTTCACAACCACCCTACACTGAATATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTTCTTCAGTCTTACATATATGGCTCTAAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTCTCTCTTCGTCCTCTTTTTCCAGGAGCTAGTGAAGCGGATGAGATCTACAAAATATGTGGTGTGATAGGCAGTCCAACTGCTGAATCATGGGCTGATGGACTGAAACTTGCAAGGGATATTAACTATCAGTTTCCACAGCTTGCTGGTGTACATCTTTCTGCATTGATGCCATCTGCAAGTGATGACGCAATCAGCCTTATCACATCACTTTGCTCCTGGGATCCTTGCAAGAGGCCAACAGCTTCAGAGGCTCTTCAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTTCGCACCAGAGCAGTAGCTAGAACTCCTCCACCTGTTGTAACTAGAGGAGCACTGGATCAGCAAGGGGTCAAGAGATATTCTGGTGTATTGCCTAATTCAAAGCTCACCAATAACTTTTCTTCCATGAAAGTACATCCTTCATTAGCTTCAGGTGTGCAACGGAAGCTGGATATGGTAAATCAGGATGGAATTAAGAGTGAAAAATCAACGAAGACTACCAAACAATCAAAATATCGACAGCCAGGAAAGGACAGCCCAACTTCTATAAACAAAGGGAGGATTGCACGTGGGGTTTCTGAAACAACTGAGAGGTTGGCCAATATGTCTATTGGTACTCGAAGACAGTCAATGGGGCAACCCCGTCCTCCACCAATGAAGGCAGGAGGCAATTGGATTTCTGATTCTGGAAACTTCATGCTCAGGCCCGCACAACAGATTTCGACTGGAAGAACTTTCACAAGAAAAGTTGCCGGATGA 1356 0.4292 MERYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSEGEIRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYIYGSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGSPTAESWADGLKLARDINYQFPQLAGVHLSALMPSASDDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVARTPPPVVTRGALDQQGVKRYSGVLPNSKLTNNFSSMKVHPSLASGVQRKLDMVNQDGIKSEKSTKTTKQSKYRQPGKDSPTSINKGRIARGVSETTERLANMSIGTRRQSMGQPRPPPMKAGGNWISDSGNFMLRPAQQISTGRTFTRKVAG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00094 451 MobiDBLite consensus disorder prediction 405 429 - -
Sebi50g00094 451 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi50g00094 451 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Sebi50g00094 451 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Sebi50g00094 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Sebi50g00094 451 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Sebi50g00094 451 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi50g00094 451 MobiDBLite consensus disorder prediction 354 384 - -
Sebi50g00094 451 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi50g00094 451 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Sebi50g00094 451 MobiDBLite consensus disorder prediction 354 371 - -
Sebi50g00094 451 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Sebi50g00094 451 CDD STKc_MAK_like 4 283 - -
Sebi50g00094 451 Gene3D Transferase(Phosphotransferase) domain 1 84 288 - -
Sebi50g00094 451 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00094 Sebi-Chr50 1548168 1552232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00094 1 286 Core Cell Cycle Gene Families AT1G66750 38.832 2.28e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Sebi50g00094 Pkinase 2.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00094 K08829 - gmx:100810150 835.484