Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00093 ATGGATTTGGAGGCCAAACAATGGGATGCTATAAAATATAGGCCCATTTACACACTCGTGAAAAAGTCGATTGTGGATGAGGCACTAAGCAATCTCGGAGTGGAGATGCTCAACGTTTCTCAGGTTCAGAAGATGGAATGGGAGGTGCTTGAGCCGAAGATTAAGTGCTGGCTGAGTTCCATTAAGGTCGCCGTTGGTGCTCTGTTTCACGGTGAGAAAACTCTCTATCGGTTAAGGTTTGCAGAGAGGCCGTTGCGTGCCTGTTTGGATTCCTGCGAATTGTGGCAAAGTGCAAGAAAACTCCTTATGGAGTTTATGGAGGATTGGTGGAACTTGGGTAACGATAAAAGAGATTAA 357 0.4566 MDLEAKQWDAIKYRPIYTLVKKSIVDEALSNLGVEMLNVSQVQKMEWEVLEPKIKCWLSSIKVAVGALFHGEKTLYRLRFAERPLRACLDSCELWQSARKLLMEFMEDWWNLGNDKRD 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00093 118 Gene3D Exocyst complex component Exo70 9 109 - -
Sebi50g00093 118 PANTHER EXOCYST COMPLEX PROTEIN EXO70 16 93 IPR004140 GO:0000145|GO:0006887
Sebi50g00093 118 SUPERFAMILY Cullin repeat-like 14 105 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00093 Sebi-Chr50 1543347 1544012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00093 16 107 EXO70 exocyst subunit family AT5G59730 45.652 6.50e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00093 K07195 - sind:105170373 90.8929