Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00092 ATGTTTCAATGCATAAGTTGTTCGAAGCAGGCAAAGGCAGAGGATGGAGAAGGTCGTGGAACTGGGAGTGGTACGCCGAAGAGAAAGGAAGCCGTCAAAAGCCTGACTTCGCAGGTTCTTAATCTTTCTCTCTCTTCACAAACTATCCAAGAGATGTTTGACAGGAGCCAAGCTCAAGCATGGTGGGGTATGAATTATGAAAGGATCATGGAACTTTACAATGTCCAGAGTTTGAACCATAATGTTATCAGCACTTCTGAGAGGTTTGAGGATGAGGGGGGTAATAGCCCTGTGTCTGCATGGGTAAATGCAACAGCAAGGACTCACTACTACCAAAGCTCAGCCTCAGGAATCACTTTGGACAACATTGGTGGTGGTGAAAACTTTGAAGAAGGAGGGCCATCCAATGAAGCTGCAAGAATATCCAACTCTTCTATACAGGAGGAGGAGGCTGAACTCAACATTGACAATGAGCCAGAATGGATTGAGCAGGATCAGCCTGGAGTGTTGCTCACAATCAGGGCTCTCCCTGATGGCACAAAAATCCTTTGCCGTGTCAGCCGCAGGATATTTAATGAAGAAAGTGCCAAGCTATGGTGGGAGGCTAACAGGGAGAGGATTGAAGGAGATTATCTGTGA 639 0.4648 MFQCISCSKQAKAEDGEGRGTGSGTPKRKEAVKSLTSQVLNLSLSSQTIQEMFDRSQAQAWWGMNYERIMELYNVQSLNHNVISTSERFEDEGGNSPVSAWVNATARTHYYQSSASGITLDNIGGGENFEEGGPSNEAARISNSSIQEEEAELNIDNEPEWIEQDQPGVLLTIRALPDGTKILCRVSRRIFNEESAKLWWEANRERIEGDYL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00092 212 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 44 IPR044532 -
Sebi50g00092 212 Pfam Transcription factor regulating root and shoot growth via Pin3 159 210 IPR013591 -
Sebi50g00092 212 ProSiteProfiles BRX domain profile. 159 212 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00092 Sebi-Chr50 1536328 1538367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00092 50 212 Major Intrinsic Protein MIP AT1G31880 40.341 2.37e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00092 - - gmx:100785003 134.42