Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00047 ATGAATGGTGTGGATAGAGGGCAACGGAGAAGGCGCACTCTCAAAGAACGCTTCAGATTCGCCGGAATGCGTGGGTATGGGTCCGTTGGTATCGGGATTGAATCTGGCGGCGGGGTTGGCGGCGGAGCGTCAATTTCGGGGATCACAGTAAGGGGAGGGAGAAGGAGGCACTGTGGTGATGCTGATGAGGGTGTCTGGATGCACGTGGAGCCAAGGGCGGCAACGATGTTCCCCGGGGACAGTAATGCGACGGTGATGAAGGGGGCGGCTGTGAACGGAGGGGGGTCTACCGTTGTGGGGGTTGGACGCGCTCTCGCCAACGGCGCCTGTGGCGGTGCGGTCCCGGCGACAGTGATAGGTGGCTTCGATGGTTACTGTCGTATTTTCTCTATGCTTTTCCCATGCCTCTGCGGGTGCGACTATGGTACGGACGGTGGCCGTTTTGGCTACGACTGTAGGTGGTTTGAAGAAATTGTGAGGGAGCACAATTTCAACATAGACAAATATGTGCGTGAGTTTGGGATTAATGTAAGGGAGGATCTTGCATTGGTTGATGCCCGTGTTTTGCCTCCCCCAACGCTTAAATATTATGAATCAGGCAGAGAATCAAAAGTTGACCCACGGATGGGTCAATGGAATATGATTGATAAGGTTACACTGTGA 663 0.5415 MNGVDRGQRRRRTLKERFRFAGMRGYGSVGIGIESGGGVGGGASISGITVRGGRRRHCGDADEGVWMHVEPRAATMFPGDSNATVMKGAAVNGGGSTVVGVGRALANGACGGAVPATVIGGFDGYCRIFSMLFPCLCGCDYGTDGGRFGYDCRWFEEIVREHNFNIDKYVREFGINVREDLALVDARVLPPPTLKYYESGRESKVDPRMGQWNMIDKVTL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00047 220 Pfam Argonaute linker 2 domain 159 196 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00047 Sebi-Chr50 893893 895492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00047 157 217 Eukaryotic Initiation Factors Gene Family AT1G48410 50.820 4.82e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00047 K11593 - vvi:100258447 96.2857