Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00037 ATGGAGCTGTTCCCAGCACAACCAGACTTGTCCTTGCAAATCAGTCCTCCAAACACCAAACCCACATCAAGTTGGAGGAGAACCACAGAAGAAGACATGGATTTGGGGTTTTGGAAGAGAGCTTTAGAGTCCAGAAACTCCATATCATCAATGGCTAAAACAGATACAACCTCTTTTGACCTTTCACTCTCAAATCCAAGACCTTCTTCAGAATCCAACAACACTTCAAACCTCATTCATCACTTCCAAAATGGGAATGCAGCAAACCTTAACCCTTTCCAATCTTTTCAGCAAAACCATTACTTTCACCACCAGCAACCACTCTTTCAACACCACCCTCCACAACATCACCAAAGCCTAAGCCAAGAACTTGGTTTTCTCAGACCCATCAGAGGAATCCCAGCTTTGATGAGGTCAAGATTCTTGTCACGCTTCCCTGCTAAGCGTAGCATGAGAGCTCCCAGGATGCGTTGGACTACTACACTCCATGCTCGCTTTGTTCATGCCGTTGAGCTCTTGGGTGGCCATGAAAGGGCTACTCCAAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTCACTTTAGCCCATGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACCACAGATAGAGCAGCAGCTTCTTCAGGGCAATCGGATGTTTATGACAATGGATCATCTGGAGATACTTCTGATGACTTAATGTTTGATATCAACTCTTCAAGAAGATCTGATCTCTCCATTAAGCAGCAGGGAAGATCAAGTGTTAATCAAGATAATAATAAGGAATGTCATGCCCTTTGGAGCAATTCTTCCAGGGAAGCTTGGTTGCATGGCAAGCCAAAGGGTGATTCTTGTGTTGGAAACGTGCCTTCTCTTGAGAAGGAAATTGATCCAAAATGCTTAAGCTATGAGAGACTATCAGATGGAAGTTCATCCTCAAACGTTTCAGGATCAAGCCCAAAGAAACCTAATTTGGATTTGGAATTCACCTTGGGCCAGCCCCTTTAA 1017 0.4376 MELFPAQPDLSLQISPPNTKPTSSWRRTTEEDMDLGFWKRALESRNSISSMAKTDTTSFDLSLSNPRPSSESNNTSNLIHHFQNGNAANLNPFQSFQQNHYFHHQQPLFQHHPPQHHQSLSQELGFLRPIRGIPALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDINSSRRSDLSIKQQGRSSVNQDNNKECHALWSNSSREAWLHGKPKGDSCVGNVPSLEKEIDPKCLSYERLSDGSSSSNVSGSSPKKPNLDLEFTLGQPL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00037 338 SUPERFAMILY Homeodomain-like 151 207 IPR009057 -
Sebi50g00037 338 MobiDBLite consensus disorder prediction 212 238 - -
Sebi50g00037 338 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 337 IPR044847 GO:0000976|GO:0006355|GO:0010158
Sebi50g00037 338 MobiDBLite consensus disorder prediction 307 338 - -
Sebi50g00037 338 MobiDBLite consensus disorder prediction 308 326 - -
Sebi50g00037 338 Gene3D - 153 210 - -
Sebi50g00037 338 Pfam Myb-like DNA-binding domain 155 206 IPR001005 -
Sebi50g00037 338 FunFam Myb family transcription factor 152 210 - -
Sebi50g00037 338 MobiDBLite consensus disorder prediction 1 28 - -
Sebi50g00037 338 MobiDBLite consensus disorder prediction 56 75 - -
Sebi50g00037 338 Coils Coil 335 338 - -
Sebi50g00037 338 NCBIfam myb-like DNA-binding domain, SHAQKYF class 154 207 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00037 Sebi-Chr50 679974 684373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00037 135 337 G2-like Transcription Factor Family AT5G16560 48.804 2.53e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi50g00037 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00037 - - aprc:113868756 521.546