Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00017 ATGAATGGAAGGAACAGGTTCCCCTTTACTCCATCACAATGGAAAGATCTTGAACATCAAGCTCTTATCTACAAGTACACGGCTTCAGGTATCTCTATTCCACCTGATCTTCTCTCCACTATTAGAAGAAGCTATTTGGATTCTCCTTTGTCTACTAGGCTTTTGCCTAACCAGCCACAACATTTTGGATGGAACTATCTTCAGATGGGTTTGGGAAGAAAAATAGACCCTGAGCCAGTTGGATGGAACTATCTTTAG 258 0.4147 MNGRNRFPFTPSQWKDLEHQALIYKYTASGISIPPDLLSTIRRSYLDSPLSTRLLPNQPQHFGWNYLQMGLGRKIDPEPVGWNYL 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00017 85 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi50g00017 85 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi50g00017 85 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi50g00017 85 PANTHER GROWTH-REGULATING FACTOR 5 8 79 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00017 Sebi-Chr50 287450 287799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00017 6 79 GRF Transcription Factor Family AT3G13960 62.162 7.65e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00017 - - gmx:100781613 158.688