Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00011 ATGGCAGAAGATGTAACCTATCATTTTTACAATTCTTATGCTTACAGAGTGGGTTTTAGTGTAAGGATCAGTAAAGGACACAAAGGTCATGATGGAAAGATGATTGGTAGAGTGTTTTGTTGTTCATGTGAAGGTTATCGTGAGAAAGATAAACGAGAAGCTAATACCAAGAATCCTCGTGCACAAACAAGATTTGGTTGCTTGGCTAAGATGAAAGTTAATAGTCGTTCAGCCGGGAAGTATCGTGTTACCGAATTTGTTGATGAACATACACATGAGACTACAACTCCGAGAAGGAGTCATTTGCTTAGATCTCAAAGGAAAATAACTACTTCTGAAGCATCTGAGGTTGATTTAGCGGAGATTTATGGAATTACTCCAAAAGCAAGTTGTGAGTTAATGGCCAGGAGAGTTGGCGGTCGTGAGAATCTAGGATTCATTCCAGAAGACTATAGAAATTATTTACGTTCTAAAAGAACAATTCAAATGAGGTCAGGGGATACAGTGAGGCATTGCCCAGAGCTCTATGGTGCTACCTACAAGATAAAGAAGATAGGCACGCGTGATCTGCCAAGATACTTCTCACAAATTGAACTACATGTGGTATATGTAATACCTATTACGGGTTCTCCATCAATTGCCAACCCGAGCAAGAGTGCAACATCTTTAAGGGTTACTGTCATTTCACCAACATTCAAGTGA 702 0.396 MAEDVTYHFYNSYAYRVGFSVRISKGHKGHDGKMIGRVFCCSCEGYREKDKREANTKNPRAQTRFGCLAKMKVNSRSAGKYRVTEFVDEHTHETTTPRRSHLLRSQRKITTSEASEVDLAEIYGITPKASCELMARRVGGRENLGFIPEDYRNYLRSKRTIQMRSGDTVRHCPELYGATYKIKKIGTRDLPRYFSQIELHVVYVIPITGSPSIANPSKSATSLRVTVISPTFK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00011 233 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 162 - -
Sebi50g00011 233 Pfam FAR1 DNA-binding domain 8 94 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00011 Sebi-Chr50 193329 195247 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi50g00011 FAR1 5.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00011 K17604 - ccaj:109817905 275.018