Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi50g00009 ATGGAAGCAGGGGAAAATTGTTGCGTCAAGGTTGCGGTCCATGTACGGCCACTCATCGCCGACGAGAAGCTTCAAGGATGTAAAGATTGTGTCACCGTTGTTACCGGGAAGCCTCAGGTACAAATTGGCTCCCACTCCTTTACATTTGATCATGTTTATGGAAGCACTGGTTCTCCCTCCTGTAACATGTTTGAGGAATGTGTTGCTCCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTTGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGGACTGGCTTCAAAGAAGGTTGTCAGACAGGAATAATACCCCAAGTTATGAATGTTTTGTTCAACAAAATTGAGTCCTTAAAGCACCAGATTGAATTTCAGTTGCATGTTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATCCCTCCTCCATGAGCAAACCAGAAACTGCAAATGGGCACGCAGGAAAAATGACCTCTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGAGTCATAACCCTTGCAGGATCTACTGAAGTCAGTGTCACAACACTAAAAGAAATGGCTACTTGCCTGGAACAGGGATCATTGAGCAGAGCAACTGGGAGCACCAATATGAACAACCAATCCAGTCGATCTCATGCTATCTTCACCATCACATTAGAGCAAATGAGGAAGCTCAATACTCCCAATGAAAGCAGTTTAAATGATACTGTGAATGAAGAGTATCTTTGTGCGAAGTTGCACTTAGTAGATCTCGCTGGATCGGAACGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGTCTTCTAGCACTTGGCAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGCGTTCATGTGCCATATAGGGATAGTAAACTCACTAGGCTTTTGCAGGATTCACTTGGAGGTAACAGCAGAACTGTCATGATAGCCTGCATAAGTCCTGCTGACATTAATGCTGAGGAAACCCTAAACACTTTGAAGTATGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTGGAGTATTTGCAGGCAGAACTTTGTGCTCGTGCTGGTGGCTCTTCTGAGGAAGTTCAGGTTCTTAAGGAAAGGATTACTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGCTCTGTTGTAGAACAAAGTGAAAAGGATTCTTATGGTGGTGGCACTTGCATTGTTAAGACTGATGGGCTTAAGAGGAGCTTACCTATCATAGCAGCTGATTATCCAATGAGTGAAACAGCAGGTGATTCAAGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGGAGCAGAAAGAGGTTGTTGCATCTGAGATGAAGCTATTTGGAGTATCCGATGCTGAAGTACTCAAGCAGCACTTCGGAAGGAAGATAATGGAGCTAGAGGATGAGAAGAGAACAGTGCAGCGAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCAAATTCTGATGGACAAACACAGAAATTAGAGGATATTCATGCCCAAAAATTAAAAGCACTTGAAGCACAGATTCTGGATCTAAAGAAGAAACAAGAGAGCCAGGTCCAGCTTTTAAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAATCTATAAAGGCCCAAAAGGTTCAATTGCAACAAAGGATAAAACAAGAGGCAGAACAGTTTCGGCAATGGAAGGCTTCTAGAGAGAAAGAGCTATTGCAATTAAGGAAGGAGGGAAGAAAAAATGAGTATGAAAAGCACAAGTTGCAAGCTTTAAATCAGCGCCAGAAAATGGTCCTTCAGAGAAAAACTGAAGAAGCCGCAATGGCAACCAAAAGGTTGAAGGAATTGTTAGAAGCTCGTAAAACATCCAGCCGAGACACTTTAGTTACAATGAATGGAAGTGGAACAAATGGGCAGAGCAATGAGAAATCCTTACAACGGTGGCTTGATCACGAACTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAACAGAGCCAAGTGAGAGCAGCCCTTGCAGAGGAGTTAGCCATGCTGAAGCAAGTTAATGAATTTGCTGCTAAGGGTCTAAGTCCTCCAAGAGGAAAGAATGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGGATAGCTTCACTTGAGAACATGTTGAGCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAAAGAGAACGTGCATTCACCAATCGTGGACGCTGGAATCAGTTGCGCTCGATGGGAGAAGCCAAGAATTTACTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAGCTCTGGGAGAAGGACATGGAGATCAGAGAAATGAAAGATCAAATCAAAGAACTTGTCAGTCTATTACGGCAAAGTGAGATGAAGAGAAAGGAAGCTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCAGTTACAACCACATTGGCTACACCTCCTTCTGGAAACTCTCCAAATTCATTGAAACAATATGCTGAAGACATGAAGGGACCCTTATCTCCAGTGTCTGTGCCGGTACCAAGACAGCTAAAATTTTCACCAGGAATTGCTAATGGCTTAACGAGGGAGTCGGCAGAATTTGTAGATCAGGGTAGACGGATGATACCCATCGGGCAGCTGTCAATGAAAAAACTAGCAATTGTAGGACAAGCTTCTGGCAAGTTATGGAGGTGGAAAAGAAGTCATCATCAATGGCTACTACAATTCAAATGGAAGTGGCAGAAACCATGGAGACTTTCAGAATTGATTCGACACAGTGATGAGACAATCATGAGAGCAAGGCCACGCTCACAGGCTTTGAGACACATTTTGTGA 3096 0.4276 MEAGENCCVKVAVHVRPLIADEKLQGCKDCVTVVTGKPQVQIGSHSFTFDHVYGSTGSPSCNMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKEGCQTGIIPQVMNVLFNKIESLKHQIEFQLHVSFIEILKEEVRDLLDPSSMSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMATCLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNTPNESSLNDTVNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERITWLEAANEDLCRELHEYRSRCSVVEQSEKDSYGGGTCIVKTDGLKRSLPIIAADYPMSETAGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKEVVASEMKLFGVSDAEVLKQHFGRKIMELEDEKRTVQRERDCLLAEVENLAANSDGQTQKLEDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYEKHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKTSSRDTLVTMNGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDMEIREMKDQIKELVSLLRQSEMKRKEAEKELKVREQAVTTTLATPPSGNSPNSLKQYAEDMKGPLSPVSVPVPRQLKFSPGIANGLTRESAEFVDQGRRMIPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSELIRHSDETIMRARPRSQALRHIL 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi50g00009 1031 Coils Coil 864 898 - -
Sebi50g00009 1031 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi50g00009 1031 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi50g00009 1031 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi50g00009 1031 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi50g00009 1031 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi50g00009 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
Sebi50g00009 1031 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi50g00009 1031 MobiDBLite consensus disorder prediction 150 176 - -
Sebi50g00009 1031 Gene3D Kinesin motor domain 2 391 IPR036961 -
Sebi50g00009 1031 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi50g00009 1031 FunFam kinesin-like protein KIN-4A isoform X1 2 391 - -
Sebi50g00009 1031 Coils Coil 569 641 - -
Sebi50g00009 1031 Coils Coil 490 510 - -
Sebi50g00009 1031 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1022 IPR027640 GO:0003777|GO:0007018
Sebi50g00009 1031 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sebi50g00009 1031 Coils Coil 674 694 - -
Sebi50g00009 1031 CDD KISc_KIF4 7 364 - -
Sebi50g00009 1031 Coils Coil 526 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi50g00009 Sebi-Chr50 166451 178972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi50g00009 9 402 Calmodulin-binding Proteins AT5G65930 33.417 2.38e-54 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi50g00009 - - gmx:100802585 1868.2