Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi509g00033 ATGGCGAAGGAAGTAGAAGGGTTCAAGTTCGAACAGAGGCATGGAAAGGAGAGGGTGAGAGTTGCTCGCGTGTGGAAAGCCAAAGATGGACGCCACTTCATTGTGGAGTGGCGTGTCAGCATCAGCCTCCTCTCTGATTGCGTCGACTCCTATCTCCGTGATGACAATAAAGACATCGTTGCCACTGACACCATGAAGAACACCGTAACCCTCTTCTTTCTTCTTTTTCAATTTTTTAACTTCAACTTTTCGGTTACCTCTGATTACTCATTGCTTTATGTTAACCAAATTTCAAGATCTGAATCTGCGTGCTTCTTGTTGTATTGTGAAGTTTATCATTTTGATTCTCTTGGATCTTTGAAGGTCTATGCAAAAGCTAAGGAGTGCTCAGAAATACTTTCTGTGGAGGACTTTGCTATTGAACTTGCCAAACACTTCACATCATTTTACAAGCAGGTTACTACTGCTATTGTGAATATTGTGGAAAAACCCTGGGAGCGTGTTAGTGTGGATGGTCAACCTCATCAACATGGGTTCAAACTTGGATCTGAGAAGCATACAGCAGAGGCAATAGTAAAAAAGTCTGGTGCACTACAGTTGACTTCTGGTATTGAAGGATTTTCATTGTTGAAGACTACCAAGTCTGGTTTTGAGGGTTTTATCAGAGACAAGTACACAGCACTTCCTGAAACACGTGAAAGGATGCTGGCAACAGAAGTAACTGCACTATGGAGGTACACATATGAATCGCTGTATAGCATCCCTCAGAAGCCACTTTATTTTACAGACAGGTACTTGGACGTAAAAAGAGTTCTGACTGACACCTTTTTTGGCTCTCCAAAGGAGGGAGTCTATAGCCCATCTGTTCAAAGCACTCTCTACCAGATGGCAAAGGCCGCACTTAACAGATTTCCTGACATAGCTTCTGTCCAACTAAAGATGCCAAATATTCATTTCATACCAGTCAATATCTCAAACAAGGACGGTCCAATTGTAAAGGTATTGATTCTTTTCCCTGAAAAGCTTGCCGAACTTACACTATGGTGCTTATCATGGATTAAGATCATGTACCAAGAATACCTGGCCAGAGAGATACCGCTTTTAATTAACATGTCATATAATGTTAATGTTAATTCTGCCACTGCTGGCAATGGGTATATAAGTCTCACGCCAGAGCCACAAAGCAGCAATGCAAGTTCTGTATCATCTTCCGTAGCCAACAAAGTAGGGCGTGTTCTGTACCCTCATCCAGTGCATGCTTGGCCAGCAGTTATCTCTACCACCTTCACTCTTAGGATCAGTCCCTTTTCAAGAAACTCAACCAGTTCTGGTGATGGAATGGCACTAGTATTTGCACAAGATAATAGACCCTCACCAAATGATAGCTATGGATCATACCTTGGCATGTTTGATAGGTCTACACAAGGTGGTGTTTTTAGACAAATAGCTGTGGAGATGGACACTTTCATGAATGAATTTGATCCAGATGGAAACCACATTGGGATAGTCACAACAAGCATCACAAATACAGTTGCTTCTCAGAGTCTCAACAACACTGGCGTTGACCTCAAAAGTGGAAGAGACATTGAAGTTAAAGTTGACTATGATGGATGGACTAAAATGATTTATGTCTCTATGGGATACCCTGAAAGCCAATTAAAGAGTGTCCTTAACCATTCAATTATTCTACCTGATATAATTCCAAGCTCAGTTTTTGTTGGTTTCACAGCCTCCACTGGAAAGACTTTTCCTGAAAGCCATCAAGTCCTCAATTGGGTATTCACATCAGTGCCATTGCCAGTTCTTTCTGTTAAACCCAGTAAACTTGACACCATCAAGATCATATTGATAATTGTCATACCAGTGTTTTTGTCAGCAAGCTTAGTTCCTCTTATTTGGGAAGTTTGCAAGAGAAGACATGAGAGGGGCATCATATTAGACTCTGGTAAAATAGTAGCAGTAAAGAAGGTTTCAGCAACCTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACCATAGGGCGTCTTAGGCACAAAAACTTAGTGCAGCTTCAAGGTTGGTGCAATGAAGGTCAGAATCTTCTTTTGGTTTATGATTATATGCAAAATGGAAGCCTTGACCGGTTCATAGGTAAGGACATTCTGGATTGGCAAACCAGACACAAGATATTGACAGGATTGGCATCAGCATTACTTTACCTTCATGAAGAGTGTGGAAACCCTGTAGTTCACAGAGATGTTAAGCCTAACAATGTAATGCTGGATTCTAATTACAATGCTCATTTAGGAGATTTTGGATTAGCAAGATTACTCAAAAATGAGGACTCAGTTACTACAAACTTAGCTGGAACTCCAGGATATTTGGCCCCTGAAGTAGGCTTTACAGGGAAGGCCACCCCTGAATCAGATGTGTATAGCTTTGGCATGGTTGTACTTGAAGTCATTTGTGGTAAAAGGTCAAAATGTGTTATGGAAGAGAACAGTTTGGTAGACTATGTATGGAATTTACATGCTCAAAATTCATTGCTTGAGTGTGTTGACAAACAACTGAAAAACCAATTTGATGAGGAAGAAGCTAAGAGGGCATTGATGGTTGGATTAGCATGTTTGCATCCAGATTCCATGTTTAGGCCAAGGATGAGAAAAGTGGTGCACATTTTTCTGAATCCAAATGAACCTTTAATGGAATTACCAGGAATGAGACCCACTGGAGTTTATGTATCAGTTTCTTCTTGTACATCAATCACAGACTTTGGCTCTAGAG 2770 0.4083 MAKEVEGFKFEQRHGKERVRVARVWKAKDGRHFIVEWRVSISLLSDCVDSYLRDDNKDIVATDTMKNTVTLFFLLFQFFNFNFSVTSDYSLLYVNQISRSESACFLLYCEVYHFDSLGSLKVYAKAKECSEILSVEDFAIELAKHFTSFYKQVTTAIVNIVEKPWERVSVDGQPHQHGFKLGSEKHTAEAIVKKSGALQLTSGIEGFSLLKTTKSGFEGFIRDKYTALPETRERMLATEVTALWRYTYESLYSIPQKPLYFTDRYLDVKRVLTDTFFGSPKEGVYSPSVQSTLYQMAKAALNRFPDIASVQLKMPNIHFIPVNISNKDGPIVKVLILFPEKLAELTLWCLSWIKIMYQEYLAREIPLLINMSYNVNVNSATAGNGYISLTPEPQSSNASSVSSSVANKVGRVLYPHPVHAWPAVISTTFTLRISPFSRNSTSSGDGMALVFAQDNRPSPNDSYGSYLGMFDRSTQGGVFRQIAVEMDTFMNEFDPDGNHIGIVTTSITNTVASQSLNNTGVDLKSGRDIEVKVDYDGWTKMIYVSMGYPESQLKSVLNHSIILPDIIPSSVFVGFTASTGKTFPESHQVLNWVFTSVPLPVLSVKPSKLDTIKIILIIVIPVFLSASLVPLIWEVCKRRHERGIILDSGKIVAVKKVSATSKQGEREFLAEICTIGRLRHKNLVQLQGWCNEGQNLLLVYDYMQNGSLDRFIGKDILDWQTRHKILTGLASALLYLHEECGNPVVHRDVKPNNVMLDSNYNAHLGDFGLARLLKNEDSVTTNLAGTPGYLAPEVGFTGKATPESDVYSFGMVVLEVICGKRSKCVMEENSLVDYVWNLHAQNSLLECVDKQLKNQFDEEEAKRALMVGLACLHPDSMFRPRMRKVVHIFLNPNEPLMELPGMRPTGVYVSVSSCTSITDFGSR 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi509g00033 923 Gene3D Urate Oxidase; 7 339 - -
Sebi509g00033 923 Gene3D - 370 604 - -
Sebi509g00033 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Sebi509g00033 923 PRINTS Uricase signature 55 69 IPR002042 -
Sebi509g00033 923 PRINTS Uricase signature 15 26 IPR002042 -
Sebi509g00033 923 Pfam Uricase 13 69 IPR002042 -
Sebi509g00033 923 Pfam Uricase 201 327 IPR002042 -
Sebi509g00033 923 Pfam Uricase 122 189 IPR002042 -
Sebi509g00033 923 PANTHER - 397 624 - -
Sebi509g00033 923 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 122 196 - -
Sebi509g00033 923 NCBIfam urate oxidase 122 327 IPR002042 -
Sebi509g00033 923 SUPERFAMILY Concanavalin A-like lectins/glucanases 374 597 IPR013320 -
Sebi509g00033 923 Gene3D Transferase(Phosphotransferase) domain 1 704 894 - -
Sebi509g00033 923 CDD lectin_legume_LecRK_Arcelin_ConA 384 596 IPR001220 GO:0030246
Sebi509g00033 923 Gene3D Phosphorylase Kinase; domain 1 640 703 - -
Sebi509g00033 923 Pfam Legume lectin domain 378 597 IPR001220 GO:0030246
Sebi509g00033 923 CDD Uricase 13 331 - -
Sebi509g00033 923 Pfam Protein kinase domain 646 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi509g00033 923 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 10 73 - -
Sebi509g00033 923 FunFam probable L-type lectin-domain containing receptor kinase S.5 703 897 - -
Sebi509g00033 923 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 196 329 - -
Sebi509g00033 923 SMART serkin_6 634 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi509g00033 923 SUPERFAMILY Protein kinase-like (PK-like) 643 905 IPR011009 -
Sebi509g00033 923 ProSiteProfiles Protein kinase domain profile. 618 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi509g00033 Sebi-Chr509 749764 758716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi509g00033 384 905 Receptor kinase-like Gene Family AT5G55830 38.548 6.12e-106 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi509g00033 Pkinase 8.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi509g00033 - - gmx:102665030 840.491