Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi509g00011 ATGGGAGCCGTAGAGAACTACCACGTGATCGAGCTGGTTGGCGAGGGTTCCTTCGGGAAGGTCTACAAGGGCAGGCGCAAGCACACGGGACAGACTGTTGCGATGAAGTTCATAATGAAGCACGGGAAAACTGAGAAGGACATTCACAATTTAAGACAAGAAATCGAGATCTTAAGAAAGTTGAAGCATGAAAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAATTTTGTGTTGTCACAGAATTTGCACAAGGTGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCTGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTAAGAGCTTTACATTATTTGCATTCCAACAGGATCATACATCGAGATATGAAGCCCCAGAATATTCTTATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCAATGTCCACAAATACAGTTGTTTTGCGATCTATAAAAGGAACTCCTTTATACATGGCTCCAGAGCTTGTACGGGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGAGTTATACTGTACGAGTTATTTGTTGGCCAACCACCATTTTACACAAATTCTGTATATGCTCTCATCAGACACATTGTTAAGGATCCGGTTAAATATCCAGATCGCATGAGTCTAAATTTTAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCAGAAAGTCGACTAACTTGGCCTGCTCTTCTTGAACATCCATTTGTTAAAGAAACCTCTGATGAATTTGTCGCCAGGGAATTGCGTGAGATAAATGGTTCGCCCATGGATAGTGATACAGCACGGAGGGTTGAAGGAAAAACAATTCAAACTTCATCAGGTTTGGAGGAGAATATTGCTTCACCACTTAAGACTGAAGCTCAGTTAAATGGTCCTAACATAAACAGAACCAATTCTTCAGTGCCTGATGAGTCCCCAGGATTTTCAAATCAAAATGCTGTAGGAGAGTCAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCTCGCACAGTCAAAGGTGCAAAAATAATTGGTCAAGATAATGAAGCGTTGGGACATATTCTGTTACCGCTGAAAAAATGGTCAAGAGGATCTCAAAATATTTGCAGTGATCAAGATGTTCATGATTCTAACCAGTCACTGAGGATTCTCTCAAACCTAGTTGCAGCCGGTGCCTTCAGTTCTAGTGGACGAATAGATGAACTAATAAGCGAACTCCTTGTGTTTACTAGATCTATTATAGCCATGAAATCTGCTGAAGTTATTGACTTGATGACAAAGAGTTTCTCCATCACTAAAATTTTGCTAGATAATGCTTGGAGTTGCACTTCGAGCTCTTATTTAAATCACTGGGTTGAATTCATTGAAATCTATTCTCAGGTTGTAACTTCGATTAATGATACATCGGGAAGAGTTCTGTTTGAGTCTAGTGCCTGCATTACAGTCATACTGTCTAAAGTTGCTCAGGTGCTTAAATCATCTCCTCAAAATTCAGGCCCAGAGTCACTGAACGAAACAGCTAAGAGAATTATTGACCATGCGAAAACATCTGGTTTAGTGGACCATTTATGTCTGTGCTTAGCCACTTCAGGCTCGAGTCTTATTTCAGGCTCTTCCACTATGCTGCGGGCTGCTTCTGAAGCATGCAGAGCTCTCTGGTCTTTAATTAATGCACTGGATATCCTTTTTATGAAAAAAAGTGCCATTTTGTTTCCCATAAATGCTTTGCGGAGTCATTCTTTGCAGAGGTTGGAAATTGTGGATCGTGAGCAAGATCCCTTGTTTGAAGCAGAATCAACAAAAATAGTTGATGCAATGACAAGAGCATTCCTGAGATCCAAAGCTGTTCAGGTTGCTGTTTACTATTGTTTTCACCAACGTCTTGAGTCTGCAATGAATTGTGGTCTTCAGCTTTTGTCAAGGTGCTGCCTCCATAGTGGAATTGTTCCTGCTCTCCTTTGTGGTCTGCCCAGTTCCCTTCCTGTGACTACTGTTGTCAGTGGTGGTGGTGATGGGACTATTGTTTCAGAAATTTTCTCTGTTTTGTCGTTATGCAGTTCCTCTCTTAACAAAGATGCACATAGTGTAGAACCAAGTAGCGTTAAATGCAAATTAACAAATCCATCTGCTTTGGTCCGTCATTCATGTCTCATTCTTGCAATAATTGCACAATGTTTAAAGTCAACTGGAAGAAACTCAGCAATTTTTATGCTCACTACCTCACCAAAGAAGCAGCTTGGTCGACTTTCAGTGCTTGCTCATCATATTTCTTCTGAAGATAAAACAAATGCCTCTTCCCAACATCAAAGTGCACCAGCCATGTTGGCTTTGGCATCCATTCTATCCCTTGAATCTGGGGCTTTGGTTGAGTCTCCAATATCTGAAATTGCTATGCCCTTAATTCCTCGAACTTCTACGCTAAGTGACCATCTTAAGTTTTCATCTGGAAACGAGAACGAATTGGACCCTGGCAACTTTTGTGGGAAGCTTTCGCATTGGCAAGGGGTCAGAGATGGGTGTGTTGGTCTTTTAGATTCTAGACTCAAGTGGGGAGGACCGTTAGCTGTTCAGCAGTTGTGTGCAAGTGGCATACCTCTTCTTCTTATTGGCTTATTAAGCAATGAGTTTCTAAATGCTTCTCAAGCAAATGAGCGCCTAAACAATAGTGTTGGATTATCACCTATTGGTGTTGTATGGACAATTTCATCATTATGTCATTGTCTTTCTGGTGGTGCTTTGACTTTTCGTCAGATTTTGATTAGGAATGAACATATTAAGGTCATCTCCAACTTAATATGTGATGTTCATCTCAAGTTGATAAAATGCTGGATTGGACCTGGTGGAGGGAGAACAGGAGTCAGAGATCTAATAAATGCAGTAATAGATCTGTTAGCATTTCCTTTTGTTGCTCTACAAAATGCACCTGGCTTGCCATCAGCCACTGCTTCTGTCAGCAGTGGGTTTCTTCTTAACGTTGGTTCCCCTGGTCAGAGAGTATGCATGGAAGACAAGGATGTAGTTAAGGCAATAGAAGAAGACATGGGCAAATACATTAAGATCCTTGTGGAGGTGGGTGTGCCTGGTATTATCCTTCGATGCCTAGATCATATGGAGTTGAATGATTTGGGCAGGCCTGTAGCCTTTCTCGCTAAAATGGTATGCCACCGACCTTTAGCAGTCCAACTTGTCAGTAAAGGTCTTCTGGATCCAAATAGGATGAGAAGGTTGTTTGACTATTCGGGCCCAAAAGAGGTCACCCTGGATGCCCTTATGATAATATCTGATCTTGCTCGCATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTTCTATTTTGGAGTTCTTAAAAGATTTTCTTTCTCATGAGGATCCCAATATGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGCCGCCATAGCGCCTACTTTTATAGTTCACTTGCAAGACATCAAATTGTTAGTATTCTTATCGATCGGTGCTCTGATCCGGACAAACGAACACGGAAATTTGCTTGTTTTGCTATTGGAAATGCGGCCTACCACAATGACGTGTTGTATGAAGAGCTGAGGAGATCGATTCCTCAATTGGCAAATTTGTTGCAAATGGCAGAGGAGGACAAGACTAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAAGCTTTGTGAAGACATTGTGTCAAAAGGAGCGATTCAGTCTCTCCTGAAGTTAATTTCCGATTGTGCTGTATTAGCACTAAATCCCAGCAGAAATGATTCGACAAACGAATCTCCTTTAAAGATAGCTCTCTTTTCCTTAGCAAAGATGTGTGCACACCCTCTCTGCAGACAGTTCATCCGTTCATCACCTTTGTTCCCTGTGATTGGGAGGCTTCAGCAGTCTCCAGAATCATCCATTGCCAAATATGCCTCCGTGATTATTAGCAAAGTTGCTGAACCTTGA 4008 0.4162 MGAVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSLNFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDEFVARELREINGSPMDSDTARRVEGKTIQTSSGLEENIASPLKTEAQLNGPNINRTNSSVPDESPGFSNQNAVGESGCQRLDRLENNSRTVKGAKIIGQDNEALGHILLPLKKWSRGSQNICSDQDVHDSNQSLRILSNLVAAGAFSSSGRIDELISELLVFTRSIIAMKSAEVIDLMTKSFSITKILLDNAWSCTSSSYLNHWVEFIEIYSQVVTSINDTSGRVLFESSACITVILSKVAQVLKSSPQNSGPESLNETAKRIIDHAKTSGLVDHLCLCLATSGSSLISGSSTMLRAASEACRALWSLINALDILFMKKSAILFPINALRSHSLQRLEIVDREQDPLFEAESTKIVDAMTRAFLRSKAVQVAVYYCFHQRLESAMNCGLQLLSRCCLHSGIVPALLCGLPSSLPVTTVVSGGGDGTIVSEIFSVLSLCSSSLNKDAHSVEPSSVKCKLTNPSALVRHSCLILAIIAQCLKSTGRNSAIFMLTTSPKKQLGRLSVLAHHISSEDKTNASSQHQSAPAMLALASILSLESGALVESPISEIAMPLIPRTSTLSDHLKFSSGNENELDPGNFCGKLSHWQGVRDGCVGLLDSRLKWGGPLAVQQLCASGIPLLLIGLLSNEFLNASQANERLNNSVGLSPIGVVWTISSLCHCLSGGALTFRQILIRNEHIKVISNLICDVHLKLIKCWIGPGGGRTGVRDLINAVIDLLAFPFVALQNAPGLPSATASVSSGFLLNVGSPGQRVCMEDKDVVKAIEEDMGKYIKILVEVGVPGIILRCLDHMELNDLGRPVAFLAKMVCHRPLAVQLVSKGLLDPNRMRRLFDYSGPKEVTLDALMIISDLARMDKGFYEYIKGASILEFLKDFLSHEDPNMRAKACSALGNMCRHSAYFYSSLARHQIVSILIDRCSDPDKRTRKFACFAIGNAAYHNDVLYEELRRSIPQLANLLQMAEEDKTKANAAGALSNLVRNSDKLCEDIVSKGAIQSLLKLISDCAVLALNPSRNDSTNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGRLQQSPESSIAKYASVIISKVAEP 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi509g00011 1335 FunFam Aurora kinase A 2 89 - -
Sebi509g00011 1335 Gene3D - 1061 1332 IPR011989 -
Sebi509g00011 1335 ProSitePatterns Protein kinases ATP-binding region signature. 13 40 IPR017441 GO:0005524
Sebi509g00011 1335 Coils Coil 41 61 - -
Sebi509g00011 1335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Sebi509g00011 1335 MobiDBLite consensus disorder prediction 299 339 - -
Sebi509g00011 1335 FunFam Serine/threonine-protein kinase TIO 1062 1331 - -
Sebi509g00011 1335 SUPERFAMILY ARM repeat 1028 1332 IPR016024 -
Sebi509g00011 1335 Coils Coil 1203 1223 - -
Sebi509g00011 1335 ProSiteProfiles Protein kinase domain profile. 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi509g00011 1335 SMART serkin_6 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi509g00011 1335 FunFam Serine/threonine-protein kinase 36 4 318 - -
Sebi509g00011 1335 SMART arm_5 1115 1155 IPR000225 GO:0005515
Sebi509g00011 1335 SMART arm_5 1198 1238 IPR000225 GO:0005515
Sebi509g00011 1335 SMART arm_5 521 572 IPR000225 GO:0005515
Sebi509g00011 1335 SMART arm_5 1239 1293 IPR000225 GO:0005515
Sebi509g00011 1335 SUPERFAMILY Protein kinase-like (PK-like) 4 266 IPR011009 -
Sebi509g00011 1335 PANTHER PROTEIN KINASE RELATED 4 1332 - -
Sebi509g00011 1335 CDD STKc_STK36 5 257 - -
Sebi509g00011 1335 Pfam Protein kinase domain 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi509g00011 1335 Gene3D Transferase(Phosphotransferase) domain 1 2 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi509g00011 Sebi-Chr509 138832 155448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi509g00011 3 246 AGC Kinase Gene Family AT3G08720 38.618 7.05e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Sebi509g00011 Pkinase 4.4e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi509g00011 K06228 - gmx:100792102 2298.86