Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi507g00010 ATGTCGAAGCAAGCATGGGCGTTTAAAGCAGAGGCTTCGTTGATGAACGTAGGGGATGAGGAGCTTAAAGGGTGGAAGATGTTCATTGGATTTCAGCACAGGGAGATTCTTGTGTCGGCGGATGGCGCTGTTCCTATTGACTCTGAGGATTTTCCGTCCGATGTGAGCAATGGAACCACCCTTGCCGGTAACCCTGTGACGGACTTGAAGACCGCCATTGAGACCGCTGGGGATTATAACCAGATGGCTGTGGGGGTTCAGATGACTGGTACACAGTTTGGCCTCGGTGCTGGTGCTACCCCAATGCCCAAATCTATCAAACTTGTTAATGATGGCTTCAAATGCCCTGGACCTAGTCGTAAAGGGTCGAGAATGTTTGTATGCTGCAGAAAGGACCCGAAAGCCAAGGCTAAGCTAGCCAAGAAAACCAAGTTCCTTCCTCGTCGCTATGGAGATCTAACAATTGCCTACGACGTGCTTCAAGCCTTCCAAACCAACTACTACGCCCAGGTGACCATTGAAAACAACCACCCATTAGGACGTCTTGATCATTGGAATTTGACATGGGAATGGCAGAAAGGAGAGTTCATTTACTCATTGAAAGGAGCTTATGCTCGCATTAAGGACCCTTCTGAGTGCTTATATGGCCCTGCTGGCAAATACTATAGGGACTTGGATTTCTCACAAGTCGCAAACTGTCAGAAAAAGCCTATCCTCTCTGATCTCCCTTCTGAAAAGCAGAGGATGAGAAGCTTGGAAAACTCCCCTGGTGTTTTACAAGTCTTCAAGATGCCACCTGATGACAACAGAACTGCTCTCACCCCACCTATGAAATGGAACATTGATGGGGTTATCAATCCAAAATACACATGTGGACCTCCAATTAGAGTTGACCCACAAGAGTTCCCTGACCCAGCTGGGCTTAGAGCAATTTCCACAGCTGTGGCTAGTTGGCAAATTGTCTGCAACATGACCAAACCAAAGCCTCAACAAAACCGTTGCTGTGTCTCATTCTCAGCATTCTATAATGAATCTGCTATCCCTTGCAACACCTGTGCTTGTGGTTGTGATGAAACAAGGAATTGCAACTCCAAAGCCTCTCCATTGCTTCTTCCACCTGATGCTCTTCTTGTGCCTTTTGTCAACAGAACCTTAAAGGCACGTGCTTGGGCCAAGCTAAAACACTTGCATGTGCCTAGCAAATTGCCTTGTGGAGATAACTGCCCTGTTAGCATCAATTGGCATGTCAGCTCAGACCACAAGGAAGGATGGACAGCTAGGATTACTCTTTTCAACTGGGGTAACAATGCCTTTGATGATTGGTTCACTGGCATCCAGTTTAAGAGGTCTTTTGATGAATTTGAAGATGTGTATTCCTTCAATGGGACTAGAATTCCTGGTATCAAAACCATCTTCTTCCAAGGCCTAAAGGGTTTGAATTACTTGGTTGGAGAAACCAATGGAACCCGTGTTGGGGACCCAAGGGTGCCTGGAAAGCAGCAATCTGTGATTTCTTTCAATAAGAAGCACATTAAAGACTTTGATGTTACACATGATGCGTTCCCTACTAAGGTTTTCTTCAATGGAATGGAGTGTGCAATTCCTCCAATCAGACCTGCCAAAAGTTCAGGGCATAAATCTTCCATCAGTGTCCTTGCTGTCATTTGCACAGCTTTTATGACCTTTTTCCTGATGACAGATCGCTTTTACTGA 1713 0.4588 MSKQAWAFKAEASLMNVGDEELKGWKMFIGFQHREILVSADGAVPIDSEDFPSDVSNGTTLAGNPVTDLKTAIETAGDYNQMAVGVQMTGTQFGLGAGATPMPKSIKLVNDGFKCPGPSRKGSRMFVCCRKDPKAKAKLAKKTKFLPRRYGDLTIAYDVLQAFQTNYYAQVTIENNHPLGRLDHWNLTWEWQKGEFIYSLKGAYARIKDPSECLYGPAGKYYRDLDFSQVANCQKKPILSDLPSEKQRMRSLENSPGVLQVFKMPPDDNRTALTPPMKWNIDGVINPKYTCGPPIRVDPQEFPDPAGLRAISTAVASWQIVCNMTKPKPQQNRCCVSFSAFYNESAIPCNTCACGCDETRNCNSKASPLLLPPDALLVPFVNRTLKARAWAKLKHLHVPSKLPCGDNCPVSINWHVSSDHKEGWTARITLFNWGNNAFDDWFTGIQFKRSFDEFEDVYSFNGTRIPGIKTIFFQGLKGLNYLVGETNGTRVGDPRVPGKQQSVISFNKKHIKDFDVTHDAFPTKVFFNGMECAIPPIRPAKSSGHKSSISVLAVICTAFMTFFLMTDRFY 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi507g00010 570 PANTHER COBRA-LIKE PROTEIN 7 258 565 - -
Sebi507g00010 570 Pfam COBRA-like protein 167 253 IPR006918 GO:0010215|GO:0016020
Sebi507g00010 570 Pfam COBRA-like protein 258 325 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi507g00010 Sebi-Chr507 475155 477628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi507g00010 1 567 COBRA Gene Family AT3G20580 59.596 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi507g00010 - - gmx:100789175 951.429