Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi507g00005 ATGTCTGAATTAGACGCAGAGATCCCTACTACCTTCGATCCTTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCTGGGTCAAAGGAATACGTGCATATTCGTATACAGCAGCGAAATGGTAGGAAAAGTTTGACAACTGTCCAAGGATTGAAGAAAGAATTCAGCTATAACAAGATACTTAAAGACCTTAAGAAAGAGTTCTGTTGCAATGGCACAGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAAAGGAAGAATGTATCTACCTTCCTAGTACAGGTAACTATCACCCCATCTTTGGAGTTTTGCAGTTAG 333 0.4174 MSELDAEIPTTFDPFAEANAEDSGAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQVTITPSLEFCS 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi507g00005 110 Gene3D - 2 107 - -
Sebi507g00005 110 PIRSF Transl_init_SUI1_Euk 1 107 IPR005874 GO:0003743
Sebi507g00005 110 Pfam Translation initiation factor SUI1 28 99 IPR001950 GO:0003743|GO:0006413
Sebi507g00005 110 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 6 101 - -
Sebi507g00005 110 CDD eIF1_SUI1 29 102 IPR005874 GO:0003743
Sebi507g00005 110 MobiDBLite consensus disorder prediction 1 25 - -
Sebi507g00005 110 FunFam Eukaryotic translation initiation factor SUI1 2 108 - -
Sebi507g00005 110 NCBIfam translation initiation factor SUI1 7 102 IPR005874 GO:0003743
Sebi507g00005 110 SUPERFAMILY eIF1-like 5 104 IPR036877 GO:0003743|GO:0006413
Sebi507g00005 110 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi507g00005 Sebi-Chr507 396999 398240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi507g00005 1 102 Eukaryotic Initiation Factors Gene Family AT4G27130 87.255 8.68e-66 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi507g00005 K03113 - jre:108983673 198.749