Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi507g00004 ATGGGTGATACCTGTAGAAACCCTAAATTAAGATCAGGTCTGAGCAATCTGGTTGATAGGACCTTCTGTTTCGGAGAGTTAAGTTTCATGTCTGAATTAGACGCAGAGATCCCTACTACCTTCGATCCTTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCCGGGTCAAAGGAATACGTGCATATTCGTATACAGCAGCGAAATGGTAGGAAAAGTTTGACAACAGTCCAAGGATTGAAGAAAGAATTCAGCTATAACAAGATACTTAAAGACCTTAAGAAAGAGTTCTGTTGCAATGGCACAGTTGTTCAAGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAAAGGAAGAATGTATCTACCTTCCTAGTACAGGTAACTATCACCCCATCTTTGGAGTTTTGCAGTTAG 420 0.4167 MGDTCRNPKLRSGLSNLVDRTFCFGELSFMSELDAEIPTTFDPFAEANAEDSGAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQVTITPSLEFCS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi507g00004 139 Gene3D - 26 136 - -
Sebi507g00004 139 CDD eIF1_SUI1 58 131 IPR005874 GO:0003743
Sebi507g00004 139 SUPERFAMILY eIF1-like 27 133 IPR036877 GO:0003743|GO:0006413
Sebi507g00004 139 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 35 130 - -
Sebi507g00004 139 NCBIfam translation initiation factor SUI1 36 131 IPR005874 GO:0003743
Sebi507g00004 139 FunFam Eukaryotic translation initiation factor SUI1 31 137 - -
Sebi507g00004 139 ProSiteProfiles Translation initiation factor SUI1 family profile. 60 130 IPR001950 GO:0003743|GO:0006413
Sebi507g00004 139 Pfam Translation initiation factor SUI1 57 128 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi507g00004 Sebi-Chr507 380118 383029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi507g00004 30 132 Eukaryotic Initiation Factors Gene Family AT4G27130 86.408 6.08e-65 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi507g00004 K03113 - pcin:129312453 228.024