Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi506g00029 ATGTGTAGATCTCTAAAGAACTTCATCGAAGCTTGGAATCCGTTGCAGCTTCCGCCGAGCGTAGAAGAAGGAGAACGAGAACGAGAACGAAGCAGTTCGTGCATCGTCAACCATATCAAAATGGTTAAAGGACGCCAAGGAGAGCGCGTTAGGCTTTACGTTAGAGGTTCAATTCTTGGATACAAGAGATCCAAGTCAAATCAATACCCAAACACCTCTCTTATCCAGATTGAGGGAGTAAACTCCAAGGAAGAGGTCTCATGGTACAGTGGGAAGCGTATGGCATACATTTACAAAGCCAAGGTAAAGCAGAATGGAACTCATTATCGCTGCATTTGGGGTAAGGTTATCAGGCCTCATGGTAACAGTGGTATAGTCCGTGCTAAGTTCAAGTCGAATCTGCCACCAAAATCAATGGGAGCAAGAGTTAGAGTCTTTATGTATCCAAGCAACATATGA 459 0.4423 MCRSLKNFIEAWNPLQLPPSVEEGERERERSSSCIVNHIKMVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNSKEEVSWYSGKRMAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi506g00029 152 SUPERFAMILY Translation proteins 52 146 IPR009000 -
Sebi506g00029 152 FunFam 60S ribosomal protein L35a 46 152 - -
Sebi506g00029 152 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 54 146 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi506g00029 152 ProSitePatterns Ribosomal protein L35Ae signature. 114 135 IPR018266 GO:0003735|GO:0005840|GO:0006412
Sebi506g00029 152 Gene3D translation elongation factor selb, chain A, domain 4 26 152 IPR038661 -
Sebi506g00029 152 PANTHER 60S RIBOSOMAL PROTEIN L35A 42 152 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi506g00029 152 Pfam Ribosomal protein L35Ae 52 146 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi506g00029 Sebi-Chr506 660819 662556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi506g00029 41 152 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 88.393 4.04e-73 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi506g00029 K02917 - oeu:111397835 228.024