Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi506g00010 ATGCTCCACAGCTTTAAGAGAAGTATTAATGGCTTTGTTGTGAAGCTCGCAGATGAGGAAGTGGAAAAAATTGCAGGCTTTCCTCAACAAGCAACTAGAAGTACTAAGGAAAGTGACATAATTATAGGAGTGCTTGATACTGGAATCTGGCCAGACTCTAGTAGCTTTGATGACTCAGGTTTTGGTCCTCCACCTACCAAATGGAAAGGAACCTGTCATAATTTCACATGCAACAACTGGAATTGTAATGCACAGCAACAGAATCAAAGATTATGGCCTGACATTGCAGCTCCAGGGGTTGAAATTCTAGCTGCATGGCCTCCAAATGCTCCTCCATCTGGTGTTAAAGGAGACAAGAGACAAGTACAGTATAATATCATCTCAGGAACATCAATGGCATGTCCACATGCTACAGGGGTAGCTGCCTACATCAAATCCTTCCATCCTACTTGGTCTCCTGCAGCAATTAAGTCAGCAATTATGACAACAGAAGCAGAATTTGCATATGGAGCAGGCCATATAGATCCTTTTATGGCATTGAATCCTGGTTTAGTATATGATGCTAGTGAGTCTGACTATGTGAATTTCTTATGCGGGCAAGGTTATGACACAGTCATGTTACAGAGAGTTACTGGTGATACTAGTACCTGTGTAGGAGTCACTGATGGGAATGTTTGGGATTTGAACTATCCTTCTTTTGCTGTTTCCACAACTTCTGGAGTATTTTTCAGCCGTGTTTTCACTAGGACTGTCACAATCACAAATGCTGGTTCCCCAACCTCCATATATAATGCTATTGTGACTGCACCAAAGGGGCTTGAGATCAAAATGAATCCTTCAAGTATGTCTTTCAGTTCTGTTGGGCAGAACCAGAACTTTCAGCTCAGAGTTCAGGGAAGCCTAGGCACCAATTTATTAGCTTCTGCTTCTTTGATATGGGATGATGGGAAACACAAAGTGAGGAGTCCCATTACTGTATTTCTGGTTGAATCAAAATAG 999 0.4194 MLHSFKRSINGFVVKLADEEVEKIAGFPQQATRSTKESDIIIGVLDTGIWPDSSSFDDSGFGPPPTKWKGTCHNFTCNNWNCNAQQQNQRLWPDIAAPGVEILAAWPPNAPPSGVKGDKRQVQYNIISGTSMACPHATGVAAYIKSFHPTWSPAAIKSAIMTTEAEFAYGAGHIDPFMALNPGLVYDASESDYVNFLCGQGYDTVMLQRVTGDTSTCVGVTDGNVWDLNYPSFAVSTTSGVFFSRVFTRTVTITNAGSPTSIYNAIVTAPKGLEIKMNPSSMSFSSVGQNQNFQLRVQGSLGTNLLASASLIWDDGKHKVRSPITVFLVESK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi506g00010 332 ProSitePatterns Serine proteases, subtilase family, serine active site. 129 139 IPR023828 -
Sebi506g00010 332 SUPERFAMILY Subtilisin-like 84 184 IPR036852 GO:0004252|GO:0006508
Sebi506g00010 332 Pfam Fibronectin type-III domain 227 326 IPR041469 -
Sebi506g00010 332 Pfam Subtilase family 86 172 IPR000209 GO:0006508|GO:0008236
Sebi506g00010 332 SUPERFAMILY Subtilisin-like 31 76 IPR036852 GO:0004252|GO:0006508
Sebi506g00010 332 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 84 IPR045051 -
Sebi506g00010 332 Gene3D Peptidase S8/S53 domain 39 80 IPR036852 GO:0004252|GO:0006508
Sebi506g00010 332 Gene3D Peptidase S8/S53 domain 87 193 IPR036852 GO:0004252|GO:0006508
Sebi506g00010 332 Gene3D - 197 328 - -
Sebi506g00010 332 ProSiteProfiles Serine proteases, subtilase domain profile. 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi506g00010 Sebi-Chr506 217981 220737 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi506g00010 91 328 Subtilisin-like Serine Gene Family AT5G58830 48.425 3.98e-71 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi506g00010 - - qsa:O6P43_014382 340.117