Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi506g00008 ATGACCTACATTGTCTACATGGGTGATCATCCTCAGGGCATGGACCCTGAAACTTTACCTTCTCTTCATACAGCAATGGCTCAAAAAGTCCTTGGCAGCAATTTTGAACCAGGAGCTGTACTTCACAGCTACAAGCACAGCTTTAATGGATTTGTCATGAAGTTAACAGAAGAGGAGGCAGAGATAATGGAAGAAATGGACAATGTTGTCTCTGTTTTCCCAAACACAAAGCATCATCTTCACACAACAAGATCCTGGGACTTCGTAGGATTTCCCCAGCAAGTCAAAAGAGCAAGTTTGGAGAGTGACATAATTGTTGGAGTAGTAGACACAGGAATTTGGCCAGAGTCTAAGAGCTTCAGTGATGAAGGATTCGGTCCTCCACCAAGCAAATGGAAGGGATCCTGCCATAACTTCACTTGCAACAACAAGATAATTGGCGCAAGATTCTTTAACATTGAAGGATCCTATACTAAAGATGACATCAAATCTCCAAAAGATACAAATGGCCATGGATCACACTGTGCATCCACAATTGTTGGAAACGTGGTGAACTCTGTAAGTGTACTAGGCTATGCCTCAGGGACAGCTCGTGGAGGAGTTCCATCAGCCCGAATTGCAGTCTACAAAGTTTGTTGGACAGATAATTGTGCTGAGGCTGATGTTCTTGCAGCATTTGATGCAGCAATTGCTGATGGAGTTGACGTGATTTCTGCTTCATTTGGACCAACTGACAAAATTCACCCTGCCTATTTTCAAAATTCAGTTAATATAGGAAGTTTTCATGCAATGAAAAGAGGAGTATTTATGTCAAATTCTGCCAATAATTTGGGCCCTGATTTTTACTCCATGACAAATTATCCACCATGGTTACTCTCTGTAGCTGCTAGCACTTTTGGCAGAGAGTTCATTACCAAAGTGCAGTTGGGCAATGGCGCCGTTTATGAGGGGTCTTCAATTAACACATTTGATCTCAAAAACAAAATGTTTCCACTGATTTTCGCTGGAGATGTACCAAACACTGCTGGTGGATTTAACAGTTCCTTATCCCGGTTTTGCGTTGAGAATTCTGTGGATAAACATTCGGTGAAGGGAAAGATCGTTATATGTGAGGGCATTCAGAATCCTTCAGACATAGGGTTTTTTTCTGGGGCAGCTGGTATTATATTTGGATATGTTTACCCAAAAGATTTACCATCAGCATTTGCCCTGCCTACGACATTCCTTAGTGGAGGGAACCTTAGAGAAATAAAATCTTACACCAAATCAACAAGAAATCCAACGGCCACAATATTTAAGAGTGACGAAGTGAAGGATTCATTATCCCCTTACATAGCATCATTCTCATCAAGAGGTCCAAACCCAATTACGCCAAACATTCTCAAGCCTGATATTGCTGCCCCAGGAGTTAATGTTCTAGCTGCATGGACTCCACTTGACCCAATTTCAGAAGTTAAAGGTGACAAAAGAGTATCACAATATAATGTGATTTCTGGCACTTCAATGGCTTGCCCTCATGCCGCCGCAACAGCTGCATACGTTAAATCATTTCACCCTAATTGGTCACCTGCTATGATAAAGTCTGCATTGATGACAACAGCTACTCCAATGAGTGCTGCTCTTAATCCTGAAGCTGAATTTGCATATGGTGCGGGGCTAATTAATCCTCTCAAGGCAACGAATCCTGGTTTAGTATATGATATTAGCGAAGCAGATTACGTTCAGTTCTTATGTGGAGAGGGCTATACAAAGAAAAAGATCCAAATTCTTACCAAAGATAAGAGTAGTTGCAAAGGAAAAGCAAACAAGAGAGCTGTGTACAACTTGAACCTTCCATCGTTTGCTCTTTATGAAAATGCCTCATCTTTAATCATGTTTTTCATAGAACAGTTACAAATGTGGGATTTGCAACATCTACTTTTAAAGCCACAATAA 1935 0.4103 MTYIVYMGDHPQGMDPETLPSLHTAMAQKVLGSNFEPGAVLHSYKHSFNGFVMKLTEEEAEIMEEMDNVVSVFPNTKHHLHTTRSWDFVGFPQQVKRASLESDIIVGVVDTGIWPESKSFSDEGFGPPPSKWKGSCHNFTCNNKIIGARFFNIEGSYTKDDIKSPKDTNGHGSHCASTIVGNVVNSVSVLGYASGTARGGVPSARIAVYKVCWTDNCAEADVLAAFDAAIADGVDVISASFGPTDKIHPAYFQNSVNIGSFHAMKRGVFMSNSANNLGPDFYSMTNYPPWLLSVAASTFGREFITKVQLGNGAVYEGSSINTFDLKNKMFPLIFAGDVPNTAGGFNSSLSRFCVENSVDKHSVKGKIVICEGIQNPSDIGFFSGAAGIIFGYVYPKDLPSAFALPTTFLSGGNLREIKSYTKSTRNPTATIFKSDEVKDSLSPYIASFSSRGPNPITPNILKPDIAAPGVNVLAAWTPLDPISEVKGDKRVSQYNVISGTSMACPHAAATAAYVKSFHPNWSPAMIKSALMTTATPMSAALNPEAEFAYGAGLINPLKATNPGLVYDISEADYVQFLCGEGYTKKKIQILTKDKSSCKGKANKRAVYNLNLPSFALYENASSLIMFFIEQLQMWDLQHLLLKPQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi506g00008 644 ProSitePatterns Serine proteases, subtilase family, serine active site. 499 509 IPR023828 -
Sebi506g00008 644 Pfam Peptidase inhibitor I9 2 81 IPR010259 -
Sebi506g00008 644 Gene3D - 300 438 - -
Sebi506g00008 644 CDD PA_subtilisin_like 307 431 - -
Sebi506g00008 644 Pfam Subtilase family 102 552 IPR000209 GO:0006508|GO:0008236
Sebi506g00008 644 ProSiteProfiles Serine proteases, subtilase domain profile. 85 560 - -
Sebi506g00008 644 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 616 IPR045051 -
Sebi506g00008 644 Gene3D - 577 626 - -
Sebi506g00008 644 PRINTS Subtilisin serine protease family (S8) signature 101 120 IPR015500 -
Sebi506g00008 644 PRINTS Subtilisin serine protease family (S8) signature 498 514 IPR015500 -
Sebi506g00008 644 PRINTS Subtilisin serine protease family (S8) signature 167 180 IPR015500 -
Sebi506g00008 644 Gene3D Peptidase S8/S53 domain 103 573 IPR036852 GO:0004252|GO:0006508
Sebi506g00008 644 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 81 IPR037045 -
Sebi506g00008 644 SUPERFAMILY Subtilisin-like 80 564 IPR036852 GO:0004252|GO:0006508
Sebi506g00008 644 ProSitePatterns Serine proteases, subtilase family, histidine active site. 171 181 IPR022398 -
Sebi506g00008 644 CDD Peptidases_S8_3 78 535 IPR034197 -
Sebi506g00008 644 FunFam Subtilisin-like protease SBT1.5 103 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi506g00008 Sebi-Chr506 184124 191758 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi506g00008 20 617 Subtilisin-like Serine Gene Family AT5G59190 47.697 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi506g00008 - - gmx:100815516 913.294