Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi506g00006 ATGCATCCCGATTTCCTCTGGCACAAGATGAACTCTATAGGCTTGCATCTTCTCATCAAAATTCTTACATGCATTCTCCTTCTCACTCAGTCATATGCTGTGGATGATCGAAAGAACTACATTGTCTTCATGGGCAATCATCCTAAGGGCGTCAAATCCACAGAATTACTTCACAGTAGTATGGTTCAAAATGTCCTCGGCAGCAAATTTGCCCCAGATGCTTTGCTTCATAGCTACAAGAAGAGTTTTAATGGATTTGTCGCGAGACTGACAAGTGAGGAAGCACTGAGAATGTCAGAATTGGATGGTGTGGTCTCTGTTTTCCCAAGTAAAAACCATAAGCTCCATACAACAAGGTCATGGGACTTCATAGGCTTCCCTCAAGATATTAGAAGAACCAGCATAGAGAGCGACATAATCATAGGAGTAATTGATACCGGAATATGGCCTGACAAACTAATTGGAGCAAAATATTTTCGCATAGATGGATTGTATGGAAAAGATGACATCATATCTCCAAGGGATTCGAATGGTCATGGGACTCACTGTGCCTCCACTGCTGCTGGAAACTCAGTTAAATCTGCAAGTTTATTTGGACTTGCTTCAGGGACAGCAAGAGGAGGAGTTCCATCAGCACGTATTGCTGTATACAAATCGTGTTGGTCAGGAGGTTGTGAAGAAGCTGACACCCTTGCAGCATTTGATGAAGCCATTGCAGATGGTGTTGACATCATTTCCCTTTCAGTGGGACCTCGAACGGTGCTACACAAAAACTATTTTGAAGACATATTTGCCATAGGAGCTTTCCATGCAATGAAGAAAGGCATATTAACATCGACATCTGCAGGTAATTTAGGTCCACAACTTTACTCAGACCCAAAAGTTGCACCATGGTTACTTTCTGTAGCAGCTAGCACTATAGACAGAAAGTTTTATACCAAGGTCCGGTTGGGCGATGGCACCATCTTTCAGGGAGTTTCAATAAATACATTTGATCTTAAAAATGTAAGTTATCCATTAATTTACGCTGGAGATGCACCCAACATCACTGGTGGATATAATAGTTCCATATCCAGGTCTTGCCTTGAAGGTTCTTTAGAACAAGATTTGGTAAAGGGAAAGATTGTTCTTTGCGATGTGTTTCGGGGTTCCTCATCAGTGGGACTCGTTTCTGGGGCAGCTGGTATTCTATTTCGTAGTTTTGCTCCAATAGATGTGGCACGTACATTTGCACTGCCAGCGATTCATCTTAGCGAAAACGATGGGAAACTCATACATTCTTACATAAATTCAACAAGAGGTCCGAATGCTATCACTCCAGACATTCTCAAGCCTGATCTAGCCGCTCCTGGAGTTGACATTTTAGCTGCATGGTCTCCAATTGCTCCCATTTCAAGGGTTAAAGCTGATGATAGAGTAGCAAACTACAACATAATATCTGGAACTTCAATGGCATGTCCTCATGCTACTGCAGCCGCTGCTTACGTCAAATCATTTCATCCCAATTGGTCACCGGCAGCAATCAAATCTGCACTAATGACCACCGCTACCCCTATGAGTGCCACACTTAATCCTGAAGCTGAATTTGCTTATGGTGCGGGGCAAATTAACCCCATTAAGGCAGTGAATCCTGGATTAGTATATGATTCCGATGAAATCGATTATGTTAAGTTTCTATGTGGACAAGGTTATGATACAAAAAAGCTACAAACCATCACAGATGATAATAGCAGTTGTACGTCAACTAATAATGGAACCGCTTGGGACCTTAATCTCCCATCTTTTGCTCTTTCCACAAACCTGTCAAGATCTTTTAGTCGCATTTTCCACAGAACTGTTACAAATGTTGGATCTGCAACATCAAGGTACAAAGCTAGAATAAACGCACCTCCATCTTTGTTAAACATTAAAGTGGAGCCAGATGTTTTGTCTTTCTCATCTGTGGGTGAAAAGAAGTCATTTACTTTAAGGATTGAAGGGAGAATTAATGTGAATATAGTTTCTTCTTCTTTGGTTTGGGATGATGGCATTTTTCAAGTAAGGAGCCCTATTGTTGTTTATGCTAAATAA 2070 0.4135 MHPDFLWHKMNSIGLHLLIKILTCILLLTQSYAVDDRKNYIVFMGNHPKGVKSTELLHSSMVQNVLGSKFAPDALLHSYKKSFNGFVARLTSEEALRMSELDGVVSVFPSKNHKLHTTRSWDFIGFPQDIRRTSIESDIIIGVIDTGIWPDKLIGAKYFRIDGLYGKDDIISPRDSNGHGTHCASTAAGNSVKSASLFGLASGTARGGVPSARIAVYKSCWSGGCEEADTLAAFDEAIADGVDIISLSVGPRTVLHKNYFEDIFAIGAFHAMKKGILTSTSAGNLGPQLYSDPKVAPWLLSVAASTIDRKFYTKVRLGDGTIFQGVSINTFDLKNVSYPLIYAGDAPNITGGYNSSISRSCLEGSLEQDLVKGKIVLCDVFRGSSSVGLVSGAAGILFRSFAPIDVARTFALPAIHLSENDGKLIHSYINSTRGPNAITPDILKPDLAAPGVDILAAWSPIAPISRVKADDRVANYNIISGTSMACPHATAAAAYVKSFHPNWSPAAIKSALMTTATPMSATLNPEAEFAYGAGQINPIKAVNPGLVYDSDEIDYVKFLCGQGYDTKKLQTITDDNSSCTSTNNGTAWDLNLPSFALSTNLSRSFSRIFHRTVTNVGSATSRYKARINAPPSLLNIKVEPDVLSFSSVGEKKSFTLRIEGRINVNIVSSSLVWDDGIFQVRSPIVVYAK 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi506g00006 689 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Sebi506g00006 689 PRINTS Subtilisin serine protease family (S8) signature 175 188 IPR015500 -
Sebi506g00006 689 PRINTS Subtilisin serine protease family (S8) signature 480 496 IPR015500 -
Sebi506g00006 689 Pfam Fibronectin type-III domain 589 686 IPR041469 -
Sebi506g00006 689 Gene3D Peptidase S8/S53 domain 432 555 IPR036852 GO:0004252|GO:0006508
Sebi506g00006 689 Gene3D Peptidase S8/S53 domain 151 307 IPR036852 GO:0004252|GO:0006508
Sebi506g00006 689 SUPERFAMILY Subtilisin-like 115 546 IPR036852 GO:0004252|GO:0006508
Sebi506g00006 689 Pfam Subtilase family 137 534 IPR000209 GO:0006508|GO:0008236
Sebi506g00006 689 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 63 686 IPR045051 -
Sebi506g00006 689 ProSitePatterns Serine proteases, subtilase family, histidine active site. 179 189 IPR022398 -
Sebi506g00006 689 ProSiteProfiles Serine proteases, subtilase domain profile. 120 542 - -
Sebi506g00006 689 CDD PA_subtilisin_like 315 437 - -
Sebi506g00006 689 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 116 IPR037045 -
Sebi506g00006 689 CDD Peptidases_S8_3 113 517 IPR034197 -
Sebi506g00006 689 Gene3D - 308 431 - -
Sebi506g00006 689 Gene3D - 559 688 - -
Sebi506g00006 689 Pfam Peptidase inhibitor I9 40 116 IPR010259 -
Sebi506g00006 689 ProSitePatterns Serine proteases, subtilase family, serine active site. 481 491 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi506g00006 Sebi-Chr506 158733 166263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi506g00006 21 688 Subtilisin-like Serine Gene Family AT3G46850 44.624 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi506g00006 - - gmx:100801111 1020.76