LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi506g00004	ATGGCTGGACTTGATGGAGTGGTGTCTGTCTTTCCTAATGAAAAGAAACAACTCCTTACAACAAAGTCTTGGGATTTTATTGGTTTTCCATACCAAGTGGCAAGAACAAATGCTGAAAGTGATGTCATCATTGGATTAATTGACTCTGGAGCCTGGCCAGAATCTGACAGTTTCAATGACAAAGGATTTGGTCCACCACCTAGAAAATGGAAGGGCACCTGCCAAACTTCCAATTTCACTTGCAACAATAAAATAATTGGTGCTAAGTATTACAGAACTGCCAGTGATGGACCCTTGAGTGAAACAGATATCAAATCTCCAAGAGACACAATTGGTCATGGAACTCATACAGCATCAACAGCAGCTGGGAATCCAGTTAGCATGGCAAGCATGTTAGGCCTTGCACAAGGAACAGCAAGAGGTGGGGCTACATCAGCACGAATTGCTGTGTATAAAGCATGTTGGGATGATGGATGTGATGAAGCAGACATTCTTGCCGCATTTGATGATGCAATTGCAGATGGGGTTGACATAATTTCAGTCTCACTTGGAGGATTCAGTGATGAAAACTATTTTAGAGATTCATTATCCATTGGGGCATTTCATGCTATGAGAAATGGAATACTGACAGTATATGCAGCAGGAAACTCAGGTCCAGCCATTGGATCCATAGACAATTTTTCACCTTGGTCAATTTCTGTAGCTGCTAGCACCTTAGACAGGAAGTTTGTTACTAAGGTCCAATTAGGAGACAACAGAACTTATGAGGGAATCTCTATAAATACATTTGACCTTAAGGGAGAATTTTATCCTATAATCTATGGTGGAGATGCACCAAATACTTCAGCTGGCTCTGATGAAACTTCATCTAGGATTTGCTATATGAATTCTTTGGATAAAAATTTGGTGAAGGGTAAAATTGTTCTCTGTGAGGGCGGAATGGGGATAGGAGCCTTAAAAGCTGGTGCTGTTGGTATCCTGACACAAGGACAAATTTCTAGAAATGATGCATACTCTTATCCCTTACCTGCATCTTTCCTTGACTTGAAGGATGGTGCTGATATATTTGACTACGTAAAGTCTGTAAGGACTCCCACTGGAACCATATTTAAGAGTATTGAGTTTAAAGATACTTTGGCCCCTGAAGTGGCCTCTTTCTCATCAAGGGGTCCGAACATTGTTACACCTGAAATTCTCAAGCCGGATCTGATTGCTCCTGGAGTGGACATTATAGCTAGTTGGTCTCCAATTTCCCCTGTTTCTGGATTTGATGGTGACAAAAGAAAATTAGAGTTCAATATTATCTCAGGAACATCAATGTCTTGCCCACATGTGTCTGGTGCAGCAGGGTACATCAAATCATTTCATCCTTCATGGTCTCCTGCTGCTATCCGTTCAGCTCTAATGACAACAGCTAAACAGTTTACTCCCATGAATAACCTTGATGCAGAATTTGGATATGGAGCAGGACTAATTGATCCTTCTAAGGCTGTGAATCCTGGTTTAGTATATGATGCTGATGAAAGTGATTATGTAAGGTTTTTATGTGGACAGGGCTATAGTTTAAAGAATTTACAACTCATCACAGGGGATAATAGCACCTGCTCTGAGACAACTTATGGAACAGCAAGGGATCTAAACTATCCTTCCTTTGCTCTTCAAGCCTCACTCTCTATGCCCAATGTGAGTGGTAGTTTCAAAAGGACTGTTACAAATGTTGGTTCAGCAAAGTCCACATATAAAGCTGTTGTGACAGCACCTCAAGGACTTAGAATCCAAGTGAATCCAAGCGTTTTGTCATTCACTTCTCTTGGCCAAAAGCAAACATTTGTTCTCAGTATTGATGGAGCAATAGATAGACCTATTGTGTCAGCTTCTTTGGTTTGGGATGATGGTAAATTCCAAGTGAGGAGCCCCATTGTTGTGTTTAATGTAGCAATACCATAA	1947	0.4088	MAGLDGVVSVFPNEKKQLLTTKSWDFIGFPYQVARTNAESDVIIGLIDSGAWPESDSFNDKGFGPPPRKWKGTCQTSNFTCNNKIIGAKYYRTASDGPLSETDIKSPRDTIGHGTHTASTAAGNPVSMASMLGLAQGTARGGATSARIAVYKACWDDGCDEADILAAFDDAIADGVDIISVSLGGFSDENYFRDSLSIGAFHAMRNGILTVYAAGNSGPAIGSIDNFSPWSISVAASTLDRKFVTKVQLGDNRTYEGISINTFDLKGEFYPIIYGGDAPNTSAGSDETSSRICYMNSLDKNLVKGKIVLCEGGMGIGALKAGAVGILTQGQISRNDAYSYPLPASFLDLKDGADIFDYVKSVRTPTGTIFKSIEFKDTLAPEVASFSSRGPNIVTPEILKPDLIAPGVDIIASWSPISPVSGFDGDKRKLEFNIISGTSMSCPHVSGAAGYIKSFHPSWSPAAIRSALMTTAKQFTPMNNLDAEFGYGAGLIDPSKAVNPGLVYDADESDYVRFLCGQGYSLKNLQLITGDNSTCSETTYGTARDLNYPSFALQASLSMPNVSGSFKRTVTNVGSAKSTYKAVVTAPQGLRIQVNPSVLSFTSLGQKQTFVLSIDGAIDRPIVSASLVWDDGKFQVRSPIVVFNVAIP	648

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi506g00004	648	CDD	Peptidases_S8_3	16	472	IPR034197	-
	Sebi506g00004	648	Gene3D	-	240	376	-	-
	Sebi506g00004	648	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	5	642	IPR045051	-
	Sebi506g00004	648	PRINTS	Subtilisin serine protease family (S8) signature	39	58	IPR015500	-
	Sebi506g00004	648	PRINTS	Subtilisin serine protease family (S8) signature	436	452	IPR015500	-
	Sebi506g00004	648	PRINTS	Subtilisin serine protease family (S8) signature	109	122	IPR015500	-
	Sebi506g00004	648	FunFam	Subtilisin-like protease SBT1.5	41	258	-	-
	Sebi506g00004	648	Pfam	Fibronectin type-III domain	545	642	IPR041469	-
	Sebi506g00004	648	CDD	PA_subtilisin_like	247	369	-	-
	Sebi506g00004	648	Pfam	Subtilase family	40	488	IPR000209	GO:0006508\|GO:0008236
	Sebi506g00004	648	Gene3D	Peptidase S8/S53 domain	41	511	IPR036852	GO:0004252\|GO:0006508
	Sebi506g00004	648	ProSiteProfiles	Serine proteases, subtilase domain profile.	23	498	-	-
	Sebi506g00004	648	ProSitePatterns	Serine proteases, subtilase family, serine active site.	437	447	IPR023828	-
	Sebi506g00004	648	SUPERFAMILY	Subtilisin-like	18	502	IPR036852	GO:0004252\|GO:0006508
	Sebi506g00004	648	MobiDBLite	consensus disorder prediction	97	122	-	-
	Sebi506g00004	648	Gene3D	-	515	645	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi506g00004	Sebi-Chr506	103713	106804	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi506g00004	1	643	Subtilisin-like Serine Gene Family	AT5G59100	48.407	0.0	598

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi506g00004	-		-	gmx:100784447	1019.22