Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi505g00026 ATGGAAAGAATGTTCCCTCCTAATCTTAAGAAGCCCTCAACTTTGAATTCCCATGACAGACCCATGTGTGTCCAAGGTGACTCAGGCCTTGTCCTCACCACTGACCCAAAGCCACGCCTTCGTTGGACCGTTGAGCTTCATGAGCGTTTCGTTGATGCTGTTACTCAGCTTGGAGGACCTGATAAGGCTACTCCTAAAACAATTATGAGGGTTATGGGTGTGAAGGGTCTCACCCTTTACCATCTCAAGAGCCATCTTCAGCCCCACAAGGAATTCAATGAGCACTCAATTAAGGATAGCATGAGAGCTTCGGCTTTAGAACTGCAACGAAATACTGGCTCCTCTTCTGCCATGATTGGCCGCAACATGAATGAGATGCAAATGGAGGTGCAGAGAAGATTGCATGAACAACTAGAGGTTCAGAAGCATCTTCAGCTGAGGATAGAGGCTCAAGGAAAATACATGCAGAGTATATTGGAGAAGGCTTATAACACACTTGCAGGTGAAAACAACATGGCAACTGCTGCTACAAACATAAAGGGTGGTATTGGAGCACATCAAGGCATGATCCCTGACATGAAAGAATTTGGTTCCCCTCCTCTTAATTTTTCTTCTTTTCAAGATCTTAACCTTTATGGTGGTAGTAGTAGTAGTGGGGACCAACTTGATCTTCATCAGCAGAACATGGATGGGTTTATGCCAACTAATGAGAATTTATTTGTGGGGAAGAAAAGGCCTAACCCTTATACTGGAAAGAGCCCATTGATTTGGAATGATGATCTCAGGCTTCAAGATTTGGGAACTTCTTCATCATGCCAAGATGTTACTTTCAAAGGTGACCAGATTCAGATTGCACCACCATCAATGGATAGATCAGGTGGTGATAGTGATCCCATGTCTGAGATATATGACACCAAGCCAGTGCTTCAAGGAGATCAAACTGTAGGGGAAAAGAAATTTGATGCATCTATGAAACTTGAAAGGCCTTCACCAGTTAGAACAGATCAAAGGATGAGTCCTATGATCAATACTGGTAGAAGCTCACCATTTGGTTTGACTATGTAA 1065 0.4338 MERMFPPNLKKPSTLNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQPHKEFNEHSIKDSMRASALELQRNTGSSSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYNTLAGENNMATAATNIKGGIGAHQGMIPDMKEFGSPPLNFSSFQDLNLYGGSSSSGDQLDLHQQNMDGFMPTNENLFVGKKRPNPYTGKSPLIWNDDLRLQDLGTSSSCQDVTFKGDQIQIAPPSMDRSGGDSDPMSEIYDTKPVLQGDQTVGEKKFDASMKLERPSPVRTDQRMSPMINTGRSSPFGLTM 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi505g00026 354 MobiDBLite consensus disorder prediction 316 354 - -
Sebi505g00026 354 FunFam Myb family transcription factor 36 94 - -
Sebi505g00026 354 MobiDBLite consensus disorder prediction 1 20 - -
Sebi505g00026 354 Pfam MYB-CC type transfactor, LHEQLE motif 126 164 IPR025756 -
Sebi505g00026 354 NCBIfam myb-like DNA-binding domain, SHAQKYF class 37 87 IPR006447 GO:0003677
Sebi505g00026 354 MobiDBLite consensus disorder prediction 336 354 - -
Sebi505g00026 354 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Sebi505g00026 354 MobiDBLite consensus disorder prediction 318 332 - -
Sebi505g00026 354 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 17 217 IPR044848 GO:0003700
Sebi505g00026 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 94 IPR017930 -
Sebi505g00026 354 Gene3D - 36 93 - -
Sebi505g00026 354 SUPERFAMILY Homeodomain-like 36 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi505g00026 Sebi-Chr505 684840 686990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi505g00026 10 351 G2-like Transcription Factor Family AT1G79430 56.098 1.76e-114 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi505g00026 Myb_DNA-binding 6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi505g00026 - - gmx:100807793 500.36