Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi505g00012 ATGGAAACTTCAAATGGTTTTTCAAACTTGAGAAACTCTCAACACACAGGAGCATCGTTTCTATTGCCCCCTAAAAGTACATCTGAAGTTGAATTTTTCTCCCATTCAATTGCTGAATTTGAAGGATTCTCAGAGCCCAATGAGGGACTAAGGCGCCACCAACGTACATATTCTGATAGTATGCTGAGTGAGGAAATACCCTCTTGGTTGAATGAACTTCTTGATGAGCCAGACACACCTATATGCAAGAGTCATAGACGATCAGCAAGTGATTCCTTAGCATACTTACAATTTCAAAATTCGGGTGAGGAATCTGAAAGGCATTCAGTTTCTCCACAGGAGTTAGATGCTACACAATCAGACAAGTTTGAAAAACAAAATGTAGTAGACCCACAAGGCTCCTTTTTGCAACATCGTTGCTTAAATTCCAATCCTTCAGCAAGTAGAACAGAGTCAAAACGTGCCAAAAGGCATTCAGCTCAACAACAAAGGGCCAGGAAAGTTCAATACATTTCTGAACTTGAAAGAAGTATTCATGCTCTACAAGAAGAAGGATATGAAGTTTCAGCGGAGCTTGAATTTCTTGATCAGCAACACCTCATATTAGGCATGGAGAACAGGGCCCTCAAACAACGGTTGGAAAGTTTATCCCAAGAGCAGTTCATCAAATGCTGTGAGTAG 681 0.4068 METSNGFSNLRNSQHTGASFLLPPKSTSEVEFFSHSIAEFEGFSEPNEGLRRHQRTYSDSMLSEEIPSWLNELLDEPDTPICKSHRRSASDSLAYLQFQNSGEESERHSVSPQELDATQSDKFEKQNVVDPQGSFLQHRCLNSNPSASRTESKRAKRHSAQQQRARKVQYISELERSIHALQEEGYEVSAELEFLDQQHLILGMENRALKQRLESLSQEQFIKCCE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi505g00012 226 CDD bZIP_plant_RF2 153 199 IPR044759 GO:0003700|GO:0006355
Sebi505g00012 226 MobiDBLite consensus disorder prediction 1 21 - -
Sebi505g00012 226 MobiDBLite consensus disorder prediction 134 149 - -
Sebi505g00012 226 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 9 123 IPR044797 -
Sebi505g00012 226 Gene3D Classic Zinc Finger 145 199 - -
Sebi505g00012 226 MobiDBLite consensus disorder prediction 134 166 - -
Sebi505g00012 226 MobiDBLite consensus disorder prediction 99 117 - -
Sebi505g00012 226 SUPERFAMILY Leucine zipper domain 157 202 IPR046347 GO:0003700|GO:0006355
Sebi505g00012 226 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi505g00012 Sebi-Chr505 276485 277875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi505g00012 149 223 bZIP Transcription Factor Family AT2G42380 50.667 2.53e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi505g00012 - - qsa:O6P43_029999 198.749