Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi503g00011 ATGAATGGTTCAACATCCATAATCAAACCTGATGTGTTGGTCTCTGCTTCTGCAAATGGATCTACTATTAACTCAAAACAAGCAATATCTGCTTTTTCTATTGGTACTTGCATCGACGATGATCTTGGTACCATGGTTGGTCACTCATTTTTTGATGATACCATTGGGAATGATTTGCTTTCCACCTTCCTCAATATGGATAAACTAAACCCATCCTCTGGTGCTCTTGCATATACTGCAAACAACTTTCCTATTGCTAGTGGTACTACCAATATCAATGAAAGGCTTGGCGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTAACATGTTGGTCTCTACTTCTGAAAATAGCTCTACTATGAACTCAAAAAAAGCAATGTCTGCTTTTTCTATTGGTACTTGTATCAATGATGATCTTGGCATCATGGATAGTCACTCACTCTCCAATGTCACCATTGAGGAAGACTTGCTCTCCACATACCTCAATATGGATAAAATAAACCCATCCTCTTGTGCCCTTGCATCTGTTGGAGATAACTTTTCTATTGCTATTGGTACTACCAATATCAATGAAAGGCTTGACGTTGGGTCCCAAAATAGCCAATTTATGAATGGTCCAACATCCATAATCAAACCGGACATGTGGGTCTCTGCTTTTGAAAATGGCTCTACTATTAACGCAAAACAAACAATGTCTGCCTTTTCTATTGGTACTTGGATCGATGATGATCTTGGTGCTATGGATGGTCAGTCACTCTGTGATGGTACCACTGAGAAGGACGTTTTCTCCACTTACCTCAATATGGATAAACTAAACCCATCCTCTGGTGCTCTTGCATCTACTGCAGACAACTTTTTTATTGCTAATGGTACTACCAATATCAATGGAAGGCTTGACGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTGACATGTTGGTCTCTGCTTCTGAAAATGGCTCTACTATTAACTCAAGAAAAGCAATGTCTGATACTGAGCTTGCGCAGCTTGCCTTGGTTGACCATAAGTGTTCTAAAAGGATTTTGGCAAATAGACAGTCTGCTATAAGATCAAAGGAAAGGAAGGCGCGTTACATTTCGGAACTTGAAAAGAAGGTGAAAACATTGGAAACTGAAAAGACATCCTCATCTACACAATTAACTATCTTGCAAGTATGTCTTAACTCATCATTCGCATCTTATGTGTCTGTCAACTTGAGACTGTTGTTTACATGTATTTGA 1287 0.3924 MNGSTSIIKPDVLVSASANGSTINSKQAISAFSIGTCIDDDLGTMVGHSFFDDTIGNDLLSTFLNMDKLNPSSGALAYTANNFPIASGTTNINERLGVGSQHSQFMNGSTSIIKPNMLVSTSENSSTMNSKKAMSAFSIGTCINDDLGIMDSHSLSNVTIEEDLLSTYLNMDKINPSSCALASVGDNFSIAIGTTNINERLDVGSQNSQFMNGPTSIIKPDMWVSAFENGSTINAKQTMSAFSIGTWIDDDLGAMDGQSLCDGTTEKDVFSTYLNMDKLNPSSGALASTADNFFIANGTTNINGRLDVGSQHSQFMNGSTSIIKPDMLVSASENGSTINSRKAMSDTELAQLALVDHKCSKRILANRQSAIRSKERKARYISELEKKVKTLETEKTSSSTQLTILQVCLNSSFASYVSVNLRLLFTCI 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi503g00011 428 Coils Coil 374 401 - -
Sebi503g00011 428 Gene3D - 357 410 - -
Sebi503g00011 428 Pfam bZIP transcription factor 358 397 IPR004827 GO:0003700|GO:0006355
Sebi503g00011 428 SMART brlzneu 354 422 IPR004827 GO:0003700|GO:0006355
Sebi503g00011 428 SUPERFAMILY Leucine zipper domain 360 406 IPR046347 GO:0003700|GO:0006355
Sebi503g00011 428 CDD bZIP_plant_RF2 361 406 IPR044759 GO:0003700|GO:0006355
Sebi503g00011 428 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 356 406 IPR004827 GO:0003700|GO:0006355
Sebi503g00011 428 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 152 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi503g00011 Sebi-Chr503 477766 479328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi503g00011 248 410 bZIP Transcription Factor Family AT1G06070 48.066 1.46e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi503g00011 bZIP_1 6.7e-07 CL0018