Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi502g00017 ATGGCTATGGTTTCGACAGGCTACCATGCTATCAAAAATCTGTGTGGAAGGAGGGAGAGCTGGAGACTCAAAGTTAAACTGGTCCGAATTTGGAATATGTGTGCTCTTGCTACACCTGAGGAACCCTTTGCTCTCCAGATGGTTTTATTTGATGATGGGGATATGATAGAAGCAACTGTTTTGAAGCAGAACATGAGGAGATTTGCCAATGTGATGGTGGAGGGTCAGGTGTATAAGCTCACGAACTTCGGGGTGATGCTGAGCAAATGTAACTTTAGAGCATCTGGACATGACTATAAGATCATCTTCAATGCAAACACAAAGAATAATGTCGTTGTTGCTGCTGTTATACCTCATATGGGATTGAAGTTCGTTAAGACATCCGATATAAAAAATACCAATGACCATTCGGACTACCTCTTGGACTTCGTGGGAATTGTAACGGCTGTGTTCGAAGAGATGAACTTGAACAGGCAAGGCAGGCCTACACGTTTAATGCTAATAGATATGGTCGATGAAATGGGGAAGATAAGGTGTGCAGTCTTTGGGCAACTGATTGATGCAATTTGTGGCTTCCTCTCTGTTTCTCAGACAAACCTTCCTGTCATGATTTTTCAGTTGGCGAGGGTTAACCTTTACAAGGGTGAGATCGGGATCCAGAACGTTATGAACGCTACTAAGATTTGGTGGAATCTAGATATAGCAGAGGCTGTGGAATTCAAGGTCCTTTTCTCACCCATTGATGCATTCTTAGCGGTTTACAAGATTAAGACGGACATGGCAATCTCTATTATATCTGATAGGTGTCACCCAATATCCAAGAGAGATGAGTTCCTCAAGCTATACCCAAGGAAAACTATAGGTCAATTGCACGACTTAGTTGAGGTGGGAAGCACATAG 900 0.4278 MAMVSTGYHAIKNLCGRRESWRLKVKLVRIWNMCALATPEEPFALQMVLFDDGDMIEATVLKQNMRRFANVMVEGQVYKLTNFGVMLSKCNFRASGHDYKIIFNANTKNNVVVAAVIPHMGLKFVKTSDIKNTNDHSDYLLDFVGIVTAVFEEMNLNRQGRPTRLMLIDMVDEMGKIRCAVFGQLIDAICGFLSVSQTNLPVMIFQLARVNLYKGEIGIQNVMNATKIWWNLDIAEAVEFKVLFSPIDAFLAVYKIKTDMAISIISDRCHPISKRDEFLKLYPRKTIGQLHDLVEVGST 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi502g00017 299 Gene3D - 116 248 IPR012340 -
Sebi502g00017 299 CDD RPA1_DBD_A_like 22 108 - -
Sebi502g00017 299 Pfam Domain of unknown function DUF223 52 108 IPR003871 -
Sebi502g00017 299 SUPERFAMILY Nucleic acid-binding proteins 122 244 IPR012340 -
Sebi502g00017 299 Gene3D - 8 112 IPR012340 -
Sebi502g00017 299 SUPERFAMILY Nucleic acid-binding proteins 7 108 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi502g00017 Sebi-Chr502 485615 487029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi502g00017 9 244 Core DNA Replication Machinery Family AT4G19130 23.810 9.31e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi502g00017 - - lja:Lj6g3v0884310.1 204.527