Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi501g00023 ATGTACTTTCATCAGCAGCAGCAGCAACTAGCTAAGAACATCCACGCTTTAAGGATGCAAGGAGGAGGCAATGGAGCTGGAGATTCAGGACTTGTTCTCTCAACTGATGCTAAGCCTAGACTAAAGTGGACACCAGATCTTCATGAAAGGTTCATAGAAGCAGTCAATCAACTTGGAGGAGCAGATAAAGCTACACCAAAAACAGTCTTGAAAATTATGGGGATCCCTGGACTTACTCTATACCACTTAAAGAGTCACCTACAGAAATACAGGATCAGTAAAAATATGCATGGACAAACCAATACTGGCAACAACAAAATAGCATCAACCACAGAAGCACCAGGCAAAATGTCAGAAGCAAGTGGAATCCAAATGAAACATTTAAGCATAGGACTCCAGACAAACAAAAATTCAGAAATAAATGAGGCCTTAGAGATGCAAATTGAAGTTCAAAGAAGACTACATGAGCAGCTTGAGGTACAGCGACACTTACAGCTTAGGATAGAGGCTCAAGGAAAGTACCTTCAGACAGTGCTGGAAAAAGCTAGGGAGACACTAGGAAGACAAAATTTAGGTACTGTGGGACTTGATGCTGCAAAGGTTCAACTGTCTGAACTGGCATCCAGAGTATCCACTCAATGCCTTGATTCTAAATTTTCAGAACTGAAAGAATTGCAGGTACTGTGGCCTCAGCAAACACAAGAAGGCAAAGCCATTGATTGTTCAATGGGCAGTTTCTTAACCTACAGTGAGGAATCTGAAAGAGACCAAGAAACACATAACAAGGGCTTGAATTTGAGAGCCTACAATGGCACTCCATTTTTAGCTTCAAAAGAGTGTGTGGAAGAGTCTATGCTTTTGAAGTCTGATCTCTCATTGTGTGAAGAAATGAAGGAGAATAATATGATGTTTCTTTCCTCATTAAATGATGAAGTACTAAAGGGGAAGTTTTTACCAGAAAGGACCTCAAGCCTCTTATCCATGAATGTGGGAGTTCAAGAAGAAAAATTTGGAAGAAAAACTGTTTCAAAGGAAGATTTAAAAGGTGAGGGTTGGAAGAGAAGAGATGGTAGTGAAACTAGTCGAGTGCCAGTTAAACTGAACCATGACAAAGTTTCTCAAGATTATAGACTGGCTAACCTTGAAGTGAAACTGGACCTAAATTCCCATGGTGATAATGATGCTTCTTCCCAATACCAAAGGTTTGACTTGAATGGTTTCAGCTGGAATTGCTAG 1236 0.4037 MYFHQQQQQLAKNIHALRMQGGGNGAGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKIMGIPGLTLYHLKSHLQKYRISKNMHGQTNTGNNKIASTTEAPGKMSEASGIQMKHLSIGLQTNKNSEINEALEMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQTVLEKARETLGRQNLGTVGLDAAKVQLSELASRVSTQCLDSKFSELKELQVLWPQQTQEGKAIDCSMGSFLTYSEESERDQETHNKGLNLRAYNGTPFLASKECVEESMLLKSDLSLCEEMKENNMMFLSSLNDEVLKGKFLPERTSSLLSMNVGVQEEKFGRKTVSKEDLKGEGWKRRDGSETSRVPVKLNHDKVSQDYRLANLEVKLDLNSHGDNDASSQYQRFDLNGFSWNC 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi501g00023 411 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 93 IPR006447 GO:0003677
Sebi501g00023 411 Coils Coil 141 161 - -
Sebi501g00023 411 Pfam Myb-like DNA-binding domain 40 91 IPR001005 -
Sebi501g00023 411 Gene3D - 37 95 - -
Sebi501g00023 411 FunFam Myb family transcription factor 37 95 - -
Sebi501g00023 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 95 IPR017930 -
Sebi501g00023 411 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 261 IPR044848 GO:0003700
Sebi501g00023 411 Pfam MYB-CC type transfactor, LHEQLE motif 139 184 IPR025756 -
Sebi501g00023 411 SUPERFAMILY Homeodomain-like 37 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi501g00023 Sebi-Chr501 366231 368398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi501g00023 70 410 G2-like Transcription Factor Family AT3G04030 49.123 6.53e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi501g00023 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi501g00023 - - gmx:100786282 637.876