Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi501g00016 ATGGGAACCCCACAATCCAATAACTTGCCACCAGGATTTAGGTTCCACCCAACTGATGAAGAGCTCATTCTTCACTACCTTAGGAAGAAAGTGGCATTCATACCCTTGCCAGTTTCCATCATTGCAGAGGTTGATATCTACAAGTTTGATCCATGGGAGCTACCAGTCCTAGAGACCGCAAGTACCCAAATGGAGCCAAACAGGGCAGCAGCTTCAGGGTATTGGAAGGCCACAGGAACAGATAAGAGTATAGTGGCATCATGGGCAGGAGGAAGAGTGAAAGAGATCTTTGGTGTGAAGAAGTCTTTGGTGTTTTACAAAGGAAGACCCCCAAAGGGTGTCAAGACCAATTGGATCATGCATGAATATCGCCTTATAGATTACAACAAACCCATTAAGCTCAAAGACACCTCCATGAGGAAGTCCAAACACACTCTATCTTCAACCACAGAGGAAGCAGCATCAGTGCTAGTGAATGATCATGAGCAAGATCAAGCAGAAGAACAACAATTGGAAGACACCCTTTTACCAATTAAGAGTCCTTTCTCTCCCCTTCCTCCTTCTCATCAGACCACACTCATATCTCAGAAATCTCTATCCTTCTCCAACCTCTTGGATGCCACAGATTACTCCATGCTAAGCACCTTCTTATCATCTGAGAACCATTCTCCAACTGCACCCTTCAATTCAGGGAATCTTAATCAGGAATACCCCCAAAACTACACCACCAATAGCTGCTTGTTTCAGAGGAATTCTCAATCAAACCATTCAGTTTCCTACATGGAAAACATCAGGCCCAAACGCCAGCTATCAAATATAGATGATGAGGACATGCTGCTATACCCATCAAAGAAATACCTTATTAGCTCCTCTTGCAATTTCCCTAACACCAACAATGTCCAAGATGAGAACCCACAATGGAACTTCCTCTTCAAACATTCATCCATGAACCAATTACATAATTAA 966 0.4327 MGTPQSNNLPPGFRFHPTDEELILHYLRKKVAFIPLPVSIIAEVDIYKFDPWELPVLETASTQMEPNRAAASGYWKATGTDKSIVASWAGGRVKEIFGVKKSLVFYKGRPPKGVKTNWIMHEYRLIDYNKPIKLKDTSMRKSKHTLSSTTEEAASVLVNDHEQDQAEEQQLEDTLLPIKSPFSPLPPSHQTTLISQKSLSFSNLLDATDYSMLSTFLSSENHSPTAPFNSGNLNQEYPQNYTTNSCLFQRNSQSNHSVSYMENIRPKRQLSNIDDEDMLLYPSKKYLISSSCNFPNTNNVQDENPQWNFLFKHSSMNQLHN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi501g00016 321 Pfam No apical meristem (NAM) protein 10 125 IPR003441 GO:0003677|GO:0006355
Sebi501g00016 321 Gene3D NAC domain 18 159 IPR036093 GO:0003677|GO:0006355
Sebi501g00016 321 ProSiteProfiles NAC domain profile. 9 152 IPR003441 GO:0003677|GO:0006355
Sebi501g00016 321 PANTHER NAC TRANSCRIPTION FACTOR 56 9 200 - -
Sebi501g00016 321 SUPERFAMILY NAC domain 5 128 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi501g00016 Sebi-Chr501 263905 265685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi501g00016 9 293 NAC Transcription Factor Family AT3G04070 41.083 1.48e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi501g00016 NAM 2.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi501g00016 - - gmx:100806421 384.8