Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi501g00009 ATGGCAGCCCACCGCTGTCGTGCATCTAGCCCCCTCACCACCGGAATCGAAGCATCATCCTCATGGTCGTCCCTTGACTGCGTCATTTCCACCATATCTGGTGAAGGCCTCCAGCTGCAAAGGGGCAAACAACACAACAATGGTTTCACCGGACTAGATCTTGTGGGCACTCTCCCGCCAGAACTGGTCAAGTTGCCTTACCTACAAGAAATAGACTTTACTCGCAATTATCTAAACGGCACAATACCTAAGGAATGGGGCTCCATGAATCTTATCATAATTGGACTAAACGGGAATAGACTATCGGGTTCAATCCCAATAGAGCTAGCAAACATTACCACTCTCCAAAGTTTTACTGTGGAGTTCAATCAACTCTCAGGAAATCTTCCTCATGAGCTTGGGAATCTTCCCAACATTCAAAGACTGTTTCTTACCTCCAACAATTTTACTGGAGAATTACCTGCATCATTTGCCAAGCTCACTACCTTGCAAGATGTAGTGATTCAAGGAACAGGACTAAGTGGGCCAATTCCTTCTGGAATTTCACTTCTAGGAAATTTAACTGATTTGAGAATTAGTGATCTAAAAGGATCTGAATATTGGCCTTTTCCACCACTCAACAATTTGAAAAATTTGAAAATTCTGATTCTAAGGAGTTGCAACATTAATGGAACAATACCTGAATATCTTGGGACAATAACGACTTTAAAAACCTTGGATCTTTCATACAATAACTTCAGCATTGGAAGCTCAGGGCAACCATCATGTCAACAGGGAAATGTGAACGTGTTTGCAAGCTCTTCAATGGGAAGTAACTCATCAGGAACTGTTTCATGTCTAAAAAGTGTTGCTTGTCCTAAAGTTTCATACTCTCTTCATATTAATTGTGGTGGAAAACAAGTAACAATCAATGGAAGTGAAACATATGATGCTGATACAGATATAGCAGGACCATCTAGATTCCACCTTGGTGGAACTAACTGGGCATTTAGCAGCACTGGTCACTTCTTGGATAATGATCGTGGAGACTATTATGTTTGGCAAAACCAATCTAGGCTTTCCATGACTGATGCTGAATTATACATGGATGCACGTGTTTCTCCTATTTCTCTGACTTATTATGGATTTTGCTTGGGAAATGGAAACTACACAGTAAATCTACACTTTGCAGAGGTAATGTTCATTGATGGTCAAACATACAAGAGCCTAGGAAGACGTGTATTTGATGTCTACATTCAGGGGAATTTGGTGTTGAAGGATTTCGATATTGCAGAAGAAGTAGGGGGAGTTAATAAAGCAGTCACAAAATCATTCAGTGTTGTTATTAGTAGTAACACATTGGATATTCGATTATATTGGGATGGAAAAGGGACAATTGGTATTCCATTTAAAGCGGTATATGGTCCTCTTATATCAGCTATATCTGTGAATCCCGATTTCACACCTCCCTCAGAAAATGGAAGTAGCTTGTCTACAGGGGCTGTAGCTGGAATTGTGGCTACTATTGTAGTAGTCATTTTCATCCTCATGTTTGGTATACTGTGGTGGAAAGGCTGTCTTAGAAAGAAAAATCCGTTATCAAAAGAGTTAAAGGGTTTAGATCTGCAAACGGGTATATTTACCTTACGGCAAATAAAAACAGCAACAAACAACTTTAATGTTGCCAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTATACAAGGGAACTCTATTGGATGGAACTACAGTAGCTGTCAAACAACTCTCTTCAAAGTCAAGGCAAGGGAATCGAGATCAATTATTGTTGGTATATGAATATATGGAAAACAATAGTCTAGCTCGCGCTTTATTTGGCCCAGAAGAATACCAAATAAAATTAGATTGGCCAACAAGGCAAAAGATTTGTGTTGTTATCGCTAGAGGTTTGGCATATCTCCATGAAGAATCAAGATTAAAAATTGTTCATAGGGACATCAAGGCCACTAATGTTTTGCTTGATAAAGATCTCAATCCAAAGATATCCGACTTTGGTTTAGCCAAGCTCGACGATGAGGACAATACTCATATAAGCACCCAAATAGCTGGGACATATGGGTACATGGCTCCCGAATATGTTATGCATGGTTATTTGACTGATAAAGCAGATGTCTATAGTTTCGGAATTGTTGCCTTAGAACTTGTAAGTGGGAGGAGCAATACTGTTCAACGAAAAAAAGAAGCATTCCATCTTCTTGATTGGGCACATCTATTAAAAGAGAAAGGTAATCTAATGGAACTAGTTGATAAAAGATTGGGTTTGGAATTCAATGAAGAGGAGGTTATGATGATGATCAACATAGCTTTTCTATGCACAAATGTTACTGCCTCCCTTAGGCCTACAATGACTTCAGTGGTGAGCATGCTTGAAGGAAAATCTGTTGTCTTGGAGATGGTTTCAGAGTCAAGTGAAGTACTAGATGAGAAGAAGTTGGAGACAATGCGACATTATTACCAAGAGATTGAAAAAAATAAATTAAGCGGGACTCAAAACCGGAATATATTGGAGGATGACCCATGGACTGCTTCATCTACATCTGTGATTGATCTTTATCCTGTTAACCTAGATTCTTCTTATTGGGAGAAAAGAGGTTAG 2613 0.3942 MAAHRCRASSPLTTGIEASSSWSSLDCVISTISGEGLQLQRGKQHNNGFTGLDLVGTLPPELVKLPYLQEIDFTRNYLNGTIPKEWGSMNLIIIGLNGNRLSGSIPIELANITTLQSFTVEFNQLSGNLPHELGNLPNIQRLFLTSNNFTGELPASFAKLTTLQDVVIQGTGLSGPIPSGISLLGNLTDLRISDLKGSEYWPFPPLNNLKNLKILILRSCNINGTIPEYLGTITTLKTLDLSYNNFSIGSSGQPSCQQGNVNVFASSSMGSNSSGTVSCLKSVACPKVSYSLHINCGGKQVTINGSETYDADTDIAGPSRFHLGGTNWAFSSTGHFLDNDRGDYYVWQNQSRLSMTDAELYMDARVSPISLTYYGFCLGNGNYTVNLHFAEVMFIDGQTYKSLGRRVFDVYIQGNLVLKDFDIAEEVGGVNKAVTKSFSVVISSNTLDIRLYWDGKGTIGIPFKAVYGPLISAISVNPDFTPPSENGSSLSTGAVAGIVATIVVVIFILMFGILWWKGCLRKKNPLSKELKGLDLQTGIFTLRQIKTATNNFNVANKIGEGGFGPVYKGTLLDGTTVAVKQLSSKSRQGNRDQLLLVYEYMENNSLARALFGPEEYQIKLDWPTRQKICVVIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDDEDNTHISTQIAGTYGYMAPEYVMHGYLTDKADVYSFGIVALELVSGRSNTVQRKKEAFHLLDWAHLLKEKGNLMELVDKRLGLEFNEEEVMMMINIAFLCTNVTASLRPTMTSVVSMLEGKSVVLEMVSESSEVLDEKKLETMRHYYQEIEKNKLSGTQNRNILEDDPWTASSTSVIDLYPVNLDSSYWEKRG 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi501g00009 870 Gene3D - 288 479 - -
Sebi501g00009 870 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 823 - -
Sebi501g00009 870 Gene3D Ribonuclease Inhibitor 9 147 IPR032675 -
Sebi501g00009 870 SUPERFAMILY Protein kinase-like (PK-like) 536 802 IPR011009 -
Sebi501g00009 870 Gene3D Transferase(Phosphotransferase) domain 1 603 812 - -
Sebi501g00009 870 Pfam Protein kinase domain 590 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi501g00009 870 Gene3D Phosphorylase Kinase; domain 1 526 602 - -
Sebi501g00009 870 ProSiteProfiles Protein kinase domain profile. 552 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi501g00009 870 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 289 479 - -
Sebi501g00009 870 SUPERFAMILY L domain-like 49 247 - -
Sebi501g00009 870 SMART serkin_6 552 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi501g00009 870 FunFam Leucine-rich repeat receptor protein kinase EMS1 58 155 - -
Sebi501g00009 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Sebi501g00009 870 Gene3D Ribonuclease Inhibitor 148 280 IPR032675 -
Sebi501g00009 870 FunFam Putative LRR receptor-like serine/threonine-protein kinase 601 807 - -
Sebi501g00009 870 Pfam Malectin domain 291 474 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi501g00009 Sebi-Chr501 182159 192475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi501g00009 27 827 Receptor kinase-like Gene Family AT1G53420 51.294 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi501g00009 Pkinase 1.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi501g00009 - - gmx:732563 1116.68