Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi500g00027 ATGGCCAGTTATTGGTCACCTTCACCTTTTAGGGGTGATGATCAACTTCTCTATCGAACACTCGGAGCAATGGCTGATAAATATGGACCAGCATTTAACATATGGCTTGGTACTCGCCGAGCATTTGTGGTTAGTAGCTGGGAAGTGGCAAAGAATGCTTCACAACTAATGACAAGGCACTTGCCTCACGTCCCAAAACAGTTGCAACAAAGCATATGGGATACAACTATGCCGCTTGAAATGCTTAAACATGTCAGAGTTTCTGAACTCAACATGGGTATAAGGGACCTATACAATTCTTGGGTCCAAAATGGTTCAAAGCCTGTGATGGTAGAACTCAATAGATGGTTAGACGATTTGACACTGAATATGGTGGTTAGAATGGTTTGCAGGAAACGTTACTTTGATGCGCTCCCATTTTTGGGTTGGTTCGATTTTCAGGGGCATGAGAGGACAATGAAAAAAACAGCCAAGGAGTTAGATGCTATACTTGAAGGATGGCTACAAGAGCATCGCAAACAGAGAGTTGATGGTGAAGTTAAAGCAGAGGGTGAACAGGATTTCATTGATGTGATGTTGTCACTTGAGGAGGAAGGTCACTTATCAATTTCCTCTGTGACTCGGATACAAGCATCAAATCCACATGCCTGTGATACCGCGGCAGGAACACTTACTTGGGCAATCTCTTTACTCCTCAACAATCGTCTAACATTAAAAAAGGCACAAGAAGAGTTGGACATGAATATTGGCATGGAACGACAAGTTGAGGAGTCAGATATTAGAAATCTGTCTGGTCCTCTACTAGGACCAAGGGAAGCTCAAGAAGATTGTAATGTTGCTGGTTATCATGTCCCTGCTGGCACACGATTGGTGGTTAACTTATGGAAGATTCAAAGGGATCCAAGGATCTGGGAAGATCCTTCTGTTTTCAGACCTGAGAGATTTCTCACAAGCCATCATGAAGTTGATATTAGAGGCCAAAACTTTGAACTCTTTCCATTTGGTTCTGGTAGACGGTCTTGTCCTGGCATGTCATTTGCACTCCTAGTGCTTCACTTGACACTTGCCCATCTACTTCATGCATTTGAATTCGCAACCCCATCAAATGAACCTGTTGACATGACTGAAAGCCCTGGTTTAACTATTCCTAAGGCAACCCCATTAAAGGCTCTACTTACTCCACGCCTTCCAACCCAATTATATGCCTAG 1209 0.4326 MASYWSPSPFRGDDQLLYRTLGAMADKYGPAFNIWLGTRRAFVVSSWEVAKNASQLMTRHLPHVPKQLQQSIWDTTMPLEMLKHVRVSELNMGIRDLYNSWVQNGSKPVMVELNRWLDDLTLNMVVRMVCRKRYFDALPFLGWFDFQGHERTMKKTAKELDAILEGWLQEHRKQRVDGEVKAEGEQDFIDVMLSLEEEGHLSISSVTRIQASNPHACDTAAGTLTWAISLLLNNRLTLKKAQEELDMNIGMERQVEESDIRNLSGPLLGPREAQEDCNVAGYHVPAGTRLVVNLWKIQRDPRIWEDPSVFRPERFLTSHHEVDIRGQNFELFPFGSGRRSCPGMSFALLVLHLTLAHLLHAFEFATPSNEPVDMTESPGLTIPKATPLKALLTPRLPTQLYA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi500g00027 402 PRINTS P450 superfamily signature 215 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 PRINTS P450 superfamily signature 332 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 334 343 IPR017972 GO:0005506|GO:0016705
Sebi500g00027 402 Gene3D Cytochrome P450 8 391 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 Pfam Cytochrome P450 130 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 PRINTS E-class P450 group I signature 331 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 PRINTS E-class P450 group I signature 224 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 PRINTS E-class P450 group I signature 293 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 PRINTS E-class P450 group I signature 341 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 SUPERFAMILY Cytochrome P450 16 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi500g00027 402 PANTHER CYTOCHROME P450 82C3-RELATED 79 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi500g00027 Sebi-Chr500 608467 610334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi500g00027 12 402 Cytochrome P450 AT4G31940 49.370 5.80e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi500g00027 K23136 - gmx:100811993 557.37