Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi4g00119 ATGGTGCCACTTTCACCTTTCAAAGACAGATTGGTGAGGGCCTTGGAAATTGCTCAAGCCATGCATATCTTCATGAACAAAAGCCTAAGGGTTGCTGATTTGGTCATGCTCGCTTTTTGGCTGACGAGGAAATGGCTCTCACAGGAGAAACAGGCAAGTATTTATTTCATTACCCATTACTATCATGAACCATATGTGTACATGGCACCAGAGGTGATCCGGTGTGAACCTTACAATGAAAAATGTGATGTGTACAGTTTTGGGGTCATATTGAATGAGCTACTGACAGGAAATTATCCCTATATTGAGACAGAATATGGTCCCACCAAGATTGCCATGGAAGTTGTGGAAGGTAAGCTGCGGCCTGTGCTTCCCTGTGATGATGTTGGCCAACTAAAAGAGCTCATTGACCTTATTTGCCTTTGTTGGGATAGCAATCCATCTACTCGACCATCCTTCGCAAACAATCACACAGAGACTCAAAATGTATGCTAA 495 0.4323 MVPLSPFKDRLVRALEIAQAMHIFMNKSLRVADLVMLAFWLTRKWLSQEKQASIYFITHYYHEPYVYMAPEVIRCEPYNEKCDVYSFGVILNELLTGNYPYIETEYGPTKIAMEVVEGKLRPVLPCDDVGQLKELIDLICLCWDSNPSTRPSFANNHTETQNVC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi4g00119 164 Pfam Protein tyrosine and serine/threonine kinase 54 155 IPR001245 GO:0004672|GO:0006468
Sebi4g00119 164 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 155 - -
Sebi4g00119 164 Gene3D Transferase(Phosphotransferase) domain 1 10 163 - -
Sebi4g00119 164 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi4g00119 164 SUPERFAMILY Protein kinase-like (PK-like) 55 154 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi4g00119 Sebi-Chr4 4151416 4152190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi4g00119 66 155 PP2C-type Phosphatase Gene Family AT2G40860 41.176 1.29e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Sebi4g00119 PK_Tyr_Ser-Thr 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi4g00119 - - gmx:100794498 207.608