Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi4g00097 ATGGCATTTCGATTTGGGCTCCTTCTTCTTGCTTTGCTCTATTGTTTGAATGTCAATTCAGCGGATTCAGATGGTGAGTGTAGTTTACTGTTTCAAGGAGCAACATTGTTAGAGATAAAGAAGTCATTCAGGGACGTGGATAACGTTCTATATGATTGGACAGACTCACCTTCATCAGATTATTGTGCCTGGAGAGGGATCACTTGTGATAATGTCACCTTCAATGTTGTTGCACTCAATCTTTCAGGGTTGAATCTTGATGGTGAAATTTCGCCTGCAATAGGGAACCTTAAGAGCTTGGCCTCTATTGACCTCAGAGAAAACCGGCTTTCAGGGCAGATACCAGATGAGATTGGTGACTGTTCTTCTTTGAAAAGCTTGGACTTGTCATTTAATGAAATTCGAGGGGATATACCATTTTCAATTTCTAAGTTGAAACAACTGGAGAATCTGATTTTGAAAAATAATCAGTTAATTGGACCAATTCCTTCAACATTGTCTCAGATTCCTAACTTGAAAATTCTAGACCTGGCACAAAATAATCTTACTGGTGAAATACCAAGACTTATATACTGGAATGAAGTTTTGCAATATCTGGGCTTGCGGGGGAACAATTTGGTTGGTTCACTATCGCCAGACATGTGTCAGTTAACTGGGTTGTGGTATTTTGACGTGAGAAACAATAGTCTGACAGGAAGTATTCCTGAAAACATAGGCAACTGTACCTCCTTCCAGGTCTTGGATTTATCCTACAACCAGCTAACTGGAGAGATACCGTTCAATATTGGATTTCTACAAGTAGCGACCTTGTCATTGCAAGGCAACAAACTCTCTGGGCATATTCCATCAGTGATTGGTCTCATGCAAGCACTTGCTGTATTGGACTTGAGTTGTAACATGTTAAGTGGATCAATCCCTCCTATCTTAGGAAATTTGACTTACACAGAAAAATTGTACTTGCATGGAAACAAGCTGACTGGCTTCATCCCTCCAGAGCTTGGAAATATGACAAAGCTTCACTATTTGGAACTGAATAATAACCATCTAAGTGGACATATCCCACCTGAGCTTGGAAAGCTTACTGATCTATTTGATTTAAACGTTGCCAATAACAACCTTGAGGGGCCAATCCCTGGTAATATTAGCTCATGTAAAAACCTTAACAGCCTCAATGTGCATGGGAATAAGCTGAATGGAACAATCCCCCCTGCATTGCAGATCTTGGAGAGTATGACATCTTTGAATCTTTCCTCGAACAATCTTCAAGGTTCCATTCCAATTGAACTGTCACGGATTGGTAATTTGGATATGCTGGATATTTCAAACAATAATATAAGTGGCTCCATCCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGCTTGATCTTTCAAATAATGAACTCTCTGGCTTGATTCCTGAAGAACTTGGTCAGCTTCAGAACATAGCATTGTTGAGGCTTGAAAACAACAAATTAACTGGGGATGTGACGTCACTTGTAAATTGTCTTAGTCTCTCTCAGCTCAATGTGTCCTATAACAATTTAGTTGGTGTTATTCCCACGAGCAACAACTTTTCCAGGTTCCCCCCTGACAGTTTCATTGGAAACCCCGATCTTTGTGGTAATTGGCTGAATTTGCCATGTCATGGTTCTCACCCTGCAGAGCGAGTTATATTATCTAAGGCAGCTATTCTGGGAATTACTCTTGGTGCCCTTGTAATTCTTCTTGTGGTACTGCTGGCAGCTTGCCGACCACACAATCCATCTCCATTTCCTGATGGTTCACTTGATAAACCAGTTAATTACTCACCTCCAAAACTAGTGATTCTTCATATGAATATGGCACTTCATGTGTATGAGGACATCATGAGGATGACTGAAAACCTGAGTGAGAAGTATATAATTGGATATGGTGCATCAAGTACAGTTTATAAGTGTGTTCTAAAGAATTGCAAACCAGTGGCCATCAAGAGGCTCTATTCTCACTATCCCCAATGCTTGAAAGAATTTGAAACTGAACTTGAGACAGTTGGCAGCATTAAGCACCGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCCCCATATGGCCACCTTCTGTTTTATGACTACATGGAGAATGGCAGTCTATGGGATCTTCTTCATGGGCCTACCAAGAAGAAAAAGCTTGACTGGGTTCTGCGCCTAAAAATAGCACTAGGAGCAGCCCAAGGGCTTGCTTATTTACACCATGATTGCAGTCCTCGGATCATCCACAGGGATGTGAAATCATCAAATATTTTACTAGATGCAGACTTTGAGCCCCATCTCACTGATTTTGGCATTGCCAAAAGTCTCTGCCCCTCAAAGTCCCATACTTCTACTTACATAATGGGCACAATTGGATATATTGACCCTGAGTATGCAAGAACTTCCCGGCTCACTGAGAAGTCTGATGTGTACAGCTATGGTATTGTTTTGCTTGAGTTGCTAACTGGAAGGAAAGCTGTTGACAATGAATCCAACCTCCATCATTTGGTTTTGTCCAAGACAGCAAATAATGCTGTAATGGAAACCGTTGATCCTGACATTACTGCCACATGCAAGGACCTAGGAGCAGTAAAAAAGGTTTATCAACTTGCTCTATTATGCACAAAGAGGCAACCAGCTGATAGGCCCACAATGCATGAAGTGACACGTGTACTGGGAAGTCTTGTGCCATCAGCCACCCCACCAAAACAACCAGCTCCATTACCACCTGCATCTGCTAAAGTACCATGCTACATGGATGAGTATGCAAATCTCAAAACTCCACACTTAGTGAACTGTCCATCCATGAGCACCTCTGATGCCCAGCTCTTCCTCAAGTTTGGAGAGGTAATCTCTCAGAACAGTGAGTGA 2883 0.4176 MAFRFGLLLLALLYCLNVNSADSDGECSLLFQGATLLEIKKSFRDVDNVLYDWTDSPSSDYCAWRGITCDNVTFNVVALNLSGLNLDGEISPAIGNLKSLASIDLRENRLSGQIPDEIGDCSSLKSLDLSFNEIRGDIPFSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLTGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVRNNSLTGSIPENIGNCTSFQVLDLSYNQLTGEIPFNIGFLQVATLSLQGNKLSGHIPSVIGLMQALAVLDLSCNMLSGSIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMTKLHYLELNNNHLSGHIPPELGKLTDLFDLNVANNNLEGPIPGNISSCKNLNSLNVHGNKLNGTIPPALQILESMTSLNLSSNNLQGSIPIELSRIGNLDMLDISNNNISGSIPSSLGDLEHLLKLDLSNNELSGLIPEELGQLQNIALLRLENNKLTGDVTSLVNCLSLSQLNVSYNNLVGVIPTSNNFSRFPPDSFIGNPDLCGNWLNLPCHGSHPAERVILSKAAILGITLGALVILLVVLLAACRPHNPSPFPDGSLDKPVNYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSPYGHLLFYDYMENGSLWDLLHGPTKKKKLDWVLRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDADFEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLVLSKTANNAVMETVDPDITATCKDLGAVKKVYQLALLCTKRQPADRPTMHEVTRVLGSLVPSATPPKQPAPLPPASAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi4g00097 960 ProSiteProfiles Leucine-rich repeat profile. 123 146 IPR001611 GO:0005515
Sebi4g00097 960 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 265 355 - -
Sebi4g00097 960 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 31 193 - -
Sebi4g00097 960 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 706 907 - -
Sebi4g00097 960 ProSiteProfiles Protein kinase domain profile. 630 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi4g00097 960 SUPERFAMILY L domain-like 54 264 - -
Sebi4g00097 960 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Sebi4g00097 960 Gene3D Transferase(Phosphotransferase) domain 1 706 905 - -
Sebi4g00097 960 Gene3D Ribonuclease Inhibitor 32 195 IPR032675 -
Sebi4g00097 960 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 356 449 - -
Sebi4g00097 960 Pfam Leucine rich repeat 434 493 IPR001611 GO:0005515
Sebi4g00097 960 CDD STKc_IRAK 636 899 - -
Sebi4g00097 960 ProSiteProfiles Leucine-rich repeat profile. 171 193 IPR001611 GO:0005515
Sebi4g00097 960 Gene3D Ribonuclease Inhibitor 196 552 IPR032675 -
Sebi4g00097 960 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 601 705 - -
Sebi4g00097 960 Gene3D Phosphorylase Kinase; domain 1 603 705 - -
Sebi4g00097 960 SMART LRR_typ_2 456 480 IPR003591 -
Sebi4g00097 960 SMART LRR_typ_2 288 312 IPR003591 -
Sebi4g00097 960 SMART LRR_typ_2 169 193 IPR003591 -
Sebi4g00097 960 SMART LRR_typ_2 97 121 IPR003591 -
Sebi4g00097 960 SMART LRR_typ_2 336 360 IPR003591 -
Sebi4g00097 960 SMART LRR_typ_2 408 432 IPR003591 -
Sebi4g00097 960 SMART LRR_typ_2 217 241 IPR003591 -
Sebi4g00097 960 Pfam Protein kinase domain 633 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi4g00097 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Sebi4g00097 960 SMART serkin_6 630 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi4g00097 960 PANTHER LEUCINE RICH REPEAT KINASE 2 381 900 - -
Sebi4g00097 960 SUPERFAMILY Protein kinase-like (PK-like) 607 896 IPR011009 -
Sebi4g00097 960 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 194 264 - -
Sebi4g00097 960 SUPERFAMILY RNI-like 199 530 - -
Sebi4g00097 960 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Sebi4g00097 960 FunFam Leucine-rich repeat receptor-like protein kinase 457 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi4g00097 Sebi-Chr4 3429478 3437403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi4g00097 32 959 Receptor kinase-like Gene Family AT5G62230 61.853 0.0 1124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Sebi4g00097 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi4g00097 K20718 - gmx:100782307 1694.86