Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi4g00081 ATGGGCGCATCTGGAAAATGGGTAAAAGCATTAATCGGGCTTAAGAAGCCCGACAAGGCCGTTGAACACGCGAAGGAGGGTGGTGGGAAGAGCAAGAAGTGGAGGTTATGGAAGAGTTTTTCAGGTTCAGGGGACATTGGGAGCTTCAGAGGAGGGTCTGAATCTGAAGGGTCTTATTCCCCATCTGTGGCAGCGGATGCTTTCACAGCTGCAGTGGCCACTGTGGTTCGAGCTCCACCTAAGGATTTCAAACTCCTAAGGCAAGAATGGGCCGCAACCCGAATCCAAACTGCTTTCCGCGCCTTCTTGGCACGAAGGGCATTGAGGGCTTTGAAAGGAGTGGTGAGGCTTCAAGCTCTTGTACGGGGTAGATTGGTGAGGAAGCAGGCTGCGGTGACATTGAGGTGCATGCAGGCCCTAGTTCGTGTTCAAGCACGTGTAAGAGCTAGAAGGGTGCGAATGTCCATAGAGGGACAAGCTGTGCAGAACATGCTCAATGAGAGGCGCACCAAGGCTGAACTCTTGAAACAAGCTGAGGAAGGATGGTGTGATAGCAAAGGAACATTGGAAGATATCAAAACAAAACTACAGATGAGGCAAGAAGGAGCTTTCAAGAGAGAGAGAGCAATTGCATACTCTCTTTCCCAGAAGCAATGGAGACCAACCCCCATGTCCAATTCAAGAGCAAACGCCTCACTTTCCTCTCTCAACAATCACCACGAGATAGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCTAAGCCTTGGGAGAGTAGATTAATGGAGCAACAAACCCATGCTGCTGATGCCTCAGATAAGACCCCTCCACCTCCAAAGAAATGCATGGACTCTTCAAATTCCAAAACATCAGAACCATGCACTGTCAAAGTCAGAAAGAACAATGTCACCACAAGGATTTCTGCTAAACCTCCCCATATTGGGCAAGCTACTCGTTCACCCTCAAGTCCAAGTTCTGAGTTTCAATATGATGAGAGCTGTGCTTCATCTTCAATATGCACATCTACAACACCAGTATCTGGGAATGCTGCAGCATTGGCTTGTGACAGGACAGAGGATAGTAGTAACAGTAACACTAGGCCAAGTTACATGAACCTCACTGAGTCAACCAAGGCAAAGCAAAAAAACAGCAATCACTACAACAGAGCTCAAAGGCAGCAATCCATGGATGAGTTCCAGTTTCTCAAAAGGACAGCTGTTTTCTCTAATGGGGACTCCAATAGCACTGCTGGTTCTGACCCTTCAATCAACTATTCTAGGCCACTTTACCTACCAACTTATTTGGATAAGAGGGCACGCTGA 1335 0.4801 MGASGKWVKALIGLKKPDKAVEHAKEGGGKSKKWRLWKSFSGSGDIGSFRGGSESEGSYSPSVAADAFTAAVATVVRAPPKDFKLLRQEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRTKAELLKQAEEGWCDSKGTLEDIKTKLQMRQEGAFKRERAIAYSLSQKQWRPTPMSNSRANASLSSLNNHHEIDKANWGWSWLERWMAAKPWESRLMEQQTHAADASDKTPPPPKKCMDSSNSKTSEPCTVKVRKNNVTTRISAKPPHIGQATRSPSSPSSEFQYDESCASSSICTSTTPVSGNAAALACDRTEDSSNSNTRPSYMNLTESTKAKQKNSNHYNRAQRQQSMDEFQFLKRTAVFSNGDSNSTAGSDPSINYSRPLYLPTYLDKRAR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi4g00081 444 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Sebi4g00081 444 MobiDBLite consensus disorder prediction 361 397 - -
Sebi4g00081 444 SMART iq_5 110 131 IPR000048 GO:0005515
Sebi4g00081 444 SMART iq_5 87 109 IPR000048 GO:0005515
Sebi4g00081 444 PANTHER IQ-DOMAIN 5-RELATED 1 407 - -
Sebi4g00081 444 MobiDBLite consensus disorder prediction 266 333 - -
Sebi4g00081 444 Pfam IQ calmodulin-binding motif 112 129 IPR000048 GO:0005515
Sebi4g00081 444 Pfam IQ calmodulin-binding motif 90 109 IPR000048 GO:0005515
Sebi4g00081 444 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Sebi4g00081 444 MobiDBLite consensus disorder prediction 285 333 - -
Sebi4g00081 444 MobiDBLite consensus disorder prediction 414 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi4g00081 Sebi-Chr4 2893804 2896147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi4g00081 1 441 IQD Protein Family AT2G26180 58.575 2.80e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi4g00081 - - gmx:100787102 585.489