Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi4g00080 ATGGCGTTAATAGGAGGATTATTGGGTTATCTGTATGGGCCTTATTGGGGGTTAAGGAAAGTTCCTGGCCCACCATCTCTGCCTCTGGTAGGACACCTTCCCTTGCTAGCAAAGTATGGCCCTGATGTCTTCTCACTCCTCGCCAAGCAATATGGCCCAATCTACAGCCCTCAAACTCCTTTGAGTGGAGGATCTTCGCCCCAGTCATTATGGCAGCTACCTTTGACTTGTGAAGGGTGTAGTGGTGGATTTCATATGGGAAGACAACCACTAATAATCATAGCAGACGCAGAACTTTGTAAAGAGGTAGGAATAAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCAATTTCTGCTTCTCCTCTTCACCAAAAAGGTCTGTTCTTCACCAGGGGCTCACAATGGTCAACCATGAGAAATACCATATTATCCGTGTACCAGCCATCACACTTATCCAGCTTAGTGCCTACAATGCAATCATTTATAGAATCTGCAACACAAAATCTTGACACCTCAAAAGAAGACATAATCTTTTCTAATCTTTCCCTTAGGCTAGCAACTGATGTAATAGGAGAGGCAGCATTTGGTGTCAACTTTGGCCTCTCTATGCCTCATTCAGTTTGTGGATCAATCAACAATAATGCATGTGCTAGTGATGAAGTATCAGCTGATTTCATCAATCAACACATTTACTCCACAACACAGCTTAAGATGGACTTGTCTGGTTCCTTCTCCATCATATTGGGTTTACTTGTCCCAATACTTCAGGAGCCATTCAGGCAGATTCTGAAGAGAATTCCAGGCACCATGGACTGGAAAATAGAGCGTACTAATAAGAAATTGAGTGGTCGTCTTGATGAGATTGTTAAAAAGAGAATGGAAGAAAGGAACCGTACTTCAAAGAATTTCTTGTCACTCATACTGAATGCAAGAGAATCAAAGACTGTATCAGAAAATGTCTTTTCACCTGATTACATCAGTGCTGTTACTTATGAGCATCTACTTGCTGGATCAGCTACCACATCCTTTACTTTGTCATCCATTGTCTATTTGGTTGCTGGGCATCCAGAAGTTGAGAAAAAGTTGCTTCAAGAGATTGATGGGTTTGGTCCACCTGATCAGATAACCACTGCTCAAGATCTTCATGACAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCTATGAGGTTTTACACTGTCTCCCCATTGGTTGCAAGAGAAACATTAAATGAAGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGGACATGGGTATGGTTAGCACTTGGAGTTCTAGCAAAAGATGCAAGGAACTTTTCAGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAAATGTGAAGAAATGAGACGAAGGCATCCTTATGCATTCATACCATTTGGAATTGGTCCAAGGGCATGTATTGGTCAGAAATTTTCCTTGCAAGAGATCAAGCTTACCCTGATTCATTTATACAGAAAATATGTGTTTCGTCATTCACTTAACATGGAAAAGCCTGTAGAACTGGAATATGGTATAGTTCTCAACTTCAAGCATGGTGTCATGCTTAGAGCCATGAAAAGAACATAG 1605 0.4131 MALIGGLLGYLYGPYWGLRKVPGPPSLPLVGHLPLLAKYGPDVFSLLAKQYGPIYSPQTPLSGGSSPQSLWQLPLTCEGCSGGFHMGRQPLIIIADAELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRGSQWSTMRNTILSVYQPSHLSSLVPTMQSFIESATQNLDTSKEDIIFSNLSLRLATDVIGEAAFGVNFGLSMPHSVCGSINNNACASDEVSADFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNKKLSGRLDEIVKKRMEERNRTSKNFLSLILNARESKTVSENVFSPDYISAVTYEHLLAGSATTSFTLSSIVYLVAGHPEVEKKLLQEIDGFGPPDQITTAQDLHDSFPYLDQVIKEAMRFYTVSPLVARETLNEVEIGGYLLPKGTWVWLALGVLAKDARNFSEPEKFKPERFDPKCEEMRRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYRKYVFRHSLNMEKPVELEYGIVLNFKHGVMLRAMKRT 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi4g00080 534 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 Gene3D Cytochrome P450 12 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 SUPERFAMILY Cytochrome P450 15 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 PANTHER THROMBOXANE-A SYNTHASE 83 533 - -
Sebi4g00080 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Sebi4g00080 534 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi4g00080 534 Pfam Cytochrome P450 84 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi4g00080 Sebi-Chr4 2888063 2893274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi4g00080 86 533 Cytochrome P450 AT2G26170 74.107 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi4g00080 K20771 - gmx:100805689 887.871