Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi4g00071 ATGTCCAATTTGACTTCTGCTTCAAGTGAAATAAGTGCTTCTTCAGGAACCAGGAATGAAAATGGTTCTCTCTATCCTCAATACTCCTCTACTTCAACAAATCAAGAACCACAACCCAAAAAGAAGAGAAGCCTTCCTGGCCACCCAGATCCTGAGGCTGAAGTGATAGCCTTGAGTCCCCAGACACTGTTGGCAACAAACAGGAGAGGGCATAATTTGCCATGGAAGCTAAAGAAAAGAACTAGCAAAGAAATAAGAAAGAAAGTATACGTGTGCCCAGAGGCAACATGCGTTCACCATGACCCATCAAGGGCCCTTGGAGACCTCACTGGAATAAAGAAGCACTTTTTCAGGAAGCATGGGGAGAAGAAATGGAAGTGTGAGAAGTGCTCCAAGCGTTATGCAGTTCAATCGGATTGGAAAGCCCACTCCAAAATCTGTGGCACTAGAGAGTATAAATGTGACTGTGGAACCATTTTCTCTAGGAGGGACAGTTTTATCACTCACAGAGCCTTCTGTGATGCTTTAGCACAGGAGAGTGCATCACAAATAGGTGTAACAGTAAGCAACAAAACAGCACCATCTCCATCCATGGTTAGGCCCCACTTACAGCAGCAGGGTCATCACGTGCCTGAATGTACAACAACAACAAGAGGAGGAGGAGGAGGGTATAGCTCTTCGTCGTATATGGCTTCATCTTCAACTGTTTCTGGAATGGTCATGCCTTCACCTTACTTTGAAGATGGTAGTAGTGCTGCCAACACTGAAGAAGCATCTTCTCTTTTCCATGATATGATGGCTAGTACTGTGCCTTCTGCTAGTGGGTTTGAGACCTCACCCTTTGATATGAGGGGGTCAATGTTTAATCCACACAGAGATAATAATAACTTTCAGGAACTTGTTGTTTCAAAATCAACACAATCCCAGTTTAGTAAAAGCAGCAACAACATTAAGGGTTCTGGTGGAGTTGGTGCTAATAATGATGATGAAATGACAAGGGACTTTCTGAGTCTTGGAGCATTTTCTCAAAGAGATTTGTTCAATATGTCTGGGATTGATCCTTTGGGTTTTCATCATATGGCAAGCAAAGCATAA 1095 0.4329 MSNLTSASSEISASSGTRNENGSLYPQYSSTSTNQEPQPKKKRSLPGHPDPEAEVIALSPQTLLATNRRGHNLPWKLKKRTSKEIRKKVYVCPEATCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAQESASQIGVTVSNKTAPSPSMVRPHLQQQGHHVPECTTTTRGGGGGYSSSSYMASSSTVSGMVMPSPYFEDGSSAANTEEASSLFHDMMASTVPSASGFETSPFDMRGSMFNPHRDNNNFQELVVSKSTQSQFSKSSNNIKGSGGVGANNDDEMTRDFLSLGAFSQRDLFNMSGIDPLGFHHMASKA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi4g00071 364 MobiDBLite consensus disorder prediction 1 52 - -
Sebi4g00071 364 Gene3D Classic Zinc Finger 103 183 - -
Sebi4g00071 364 MobiDBLite consensus disorder prediction 304 322 - -
Sebi4g00071 364 MobiDBLite consensus disorder prediction 189 212 - -
Sebi4g00071 364 MobiDBLite consensus disorder prediction 304 328 - -
Sebi4g00071 364 FunFam protein indeterminate-domain 5, chloroplastic-like 103 182 - -
Sebi4g00071 364 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 18 342 IPR031140 -
Sebi4g00071 364 MobiDBLite consensus disorder prediction 1 40 - -
Sebi4g00071 364 SUPERFAMILY beta-beta-alpha zinc fingers 120 169 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi4g00071 Sebi-Chr4 2626176 2628656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi4g00071 30 181 IDZ Gene Family AT3G50700 72.159 2.50e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi4g00071 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi4g00071 K25870 - gmx:100807813 328.561