Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi4g00035 ATGGGTACCTGCATATCCGTTGCATCCCCAGAGATTCATGGGGTCCCTGAAGAAGTTCATGATGAGAATGTGATAATATTTGAACCAAGCAAGGTCCTAAATGGGAGTAAGAGACTTTGCTCTGTTTACTCTAAACAAGGTAGCAAAGGACTCAATCAAGATGCTGCCTCTCTTCACAAGGGTTATGGGATGGAAAATGGAACATTTTGTGGTGTCTATGATGGACATGGATGGAATGGACACATAGTGAGCAAACTAGTAAACAGTCGTTTGCCTTCTCTTATACTGAGCCAAAAGAGTGCTTTTGCAGAGTTTGATAAGATAGAAAATGGTTATTACAACACCCCAAACTATATTGGCACAGCAGAAGATGACTTGGCTTCAGAGAATTTTCATAAATGGAAAAAAGCCATTATTAGTGCTTTCAGGGTGATGGACAAGGAGGTGAAACTACAAAAGAATCTAGACTGTTCTTGCAGTGGAACTACTGCTGTAATTGTCATTAGACAGAAACATATCATAACAATTATAAGCTATAACAACAAACAGGATGAAGGTCTTATCATAGCTAATCTGGGTGACTCCAGAGCAGTCTTGGGGACAATCCATGATGAAAAACTCCAAGCCATTCAATTGACCACTGATTTGAAACCTGAATTACCTCGCGAAGCAGATAGAATAAGGAGGTACCAAGGTTGTGTGTATGCGATTAAGGAAGAACCACATGTGCAGCGAGTGTGGGCACCCAACAATGAGAACTCCCCTGGCCTAGCCATGTCTCGAGCTTTTGGAGATTTCATTCTCAAAGACTATGGTGTTATTGCCACCCCAGATATTTGCTATCACCCTCTTACATCAAATGACCAATTTATTGTTCTTGCAACTGATGGGGTGTGGGATGTACTGAGTAACGAAGAGGTTGCATCAATTGTGTGGATGGTAGACACTGAAGAGGAAGCGGCAAGGGCAGTAGTGGAAGCAGCCACTGCTGCATGGAAAAAGAAGTATCCTTCCTCTAAGGTAGATGACTGCACCGTTGTTTGCCTTTTCCTGCAGAAGAATCCACAAAACTTGTGGCTTATGAAAAGTGGAGAATTAGGTTAA 1104 0.4203 MGTCISVASPEIHGVPEEVHDENVIIFEPSKVLNGSKRLCSVYSKQGSKGLNQDAASLHKGYGMENGTFCGVYDGHGWNGHIVSKLVNSRLPSLILSQKSAFAEFDKIENGYYNTPNYIGTAEDDLASENFHKWKKAIISAFRVMDKEVKLQKNLDCSCSGTTAVIVIRQKHIITIISYNNKQDEGLIIANLGDSRAVLGTIHDEKLQAIQLTTDLKPELPREADRIRRYQGCVYAIKEEPHVQRVWAPNNENSPGLAMSRAFGDFILKDYGVIATPDICYHPLTSNDQFIVLATDGVWDVLSNEEVASIVWMVDTEEEAARAVVEAATAAWKKKYPSSKVDDCTVVCLFLQKNPQNLWLMKSGELG 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi4g00035 367 Pfam Protein phosphatase 2C 66 330 IPR001932 -
Sebi4g00035 367 SUPERFAMILY PP2C-like 30 353 IPR036457 -
Sebi4g00035 367 CDD PP2Cc 38 351 IPR001932 -
Sebi4g00035 367 Gene3D - 23 354 IPR036457 -
Sebi4g00035 367 PANTHER PROTEIN PHOSPHATASE 40 349 IPR015655 GO:0004722|GO:0006470
Sebi4g00035 367 SMART PP2C_4 29 349 IPR001932 -
Sebi4g00035 367 ProSiteProfiles PPM-type phosphatase domain profile. 39 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi4g00035 Sebi-Chr4 1498349 1500265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi4g00035 1 356 PP2C-type Phosphatase Gene Family AT5G26010 48.760 1.35e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi4g00035 - - gmx:100815312 489.574