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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Sebi49g00122
ATGGATGAAAACAAGAAGTGGATGCATAAGGAAACAGAAAGACAAAGAAGGCAAGAGATGGCCCAACTCTGCACCACACTTAGATCCCTTCTGCCTTTAGAATATATTAAGGGAAAGCGCTCAACTTCTGATCATGTGTTTGAGGCTATCAATTATATCAACCATCTACAGAATAAGGTGAAGCAATTGGAAGCTAAGAAGGATGAATTAATAAAGTTGGTGCCTAATTTGAGTACTAATATTGACCCTGATGAAAGTGAAAGCTCTACTAGCAATCTTCCACCTTTTGTTAATATTCAACCTTTTCATGGAGGCCTTGAGATTATGTGCAGTTGCAACATGTTTCCTTTGTCAAGAATTCTAGAGATATTGCTTGAAGAAGGGATTAATGTTGTTAGCAGTACTTCCACCAAAATGGATGGTAGATTCATACACACTATACGATCAGAGGATCCAATTCATCCAAATATGAGTGGCACTGATTACTCTGAGCTGCAAAGAAAGCTTATGGAAGCAATATCATCTTCAAGTTTGCAAGAGACTTTGCCTGCTGAACCTGAAAATTGCTAA
570
0.3807
MDENKKWMHKETERQRRQEMAQLCTTLRSLLPLEYIKGKRSTSDHVFEAINYINHLQNKVKQLEAKKDELIKLVPNLSTNIDPDESESSTSNLPPFVNIQPFHGGLEIMCSCNMFPLSRILEILLEEGINVVSSTSTKMDGRFIHTIRSEDPIHPNMSGTDYSELQRKLMEAISSSSLQETLPAEPENC
189
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Sebi49g00122
189
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
3
75
IPR036638
GO:0046983
Sebi49g00122
189
CDD
bHLH_AtORG2_like
5
74
-
-
Sebi49g00122
189
Pfam
Helix-loop-helix DNA-binding domain
6
57
IPR011598
GO:0046983
Sebi49g00122
189
Coils
Coil
46
80
-
-
Sebi49g00122
189
FunFam
Transcription factor bHLH126
1
84
-
-
Sebi49g00122
189
PANTHER
ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED
4
172
-
-
Sebi49g00122
189
SMART
finulus
10
62
IPR011598
GO:0046983
Sebi49g00122
189
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
4
56
IPR011598
GO:0046983
Sebi49g00122
189
Gene3D
-
1
85
IPR036638
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Sebi49g00122
Sebi-Chr49
2588489
2589462
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Sebi49g00122
9
173
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT4G25410
42.197
3.40e-36
124
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Sebi49g00122
HLH
3.5e-11
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Sebi49g00122
-
-
ccaj:109791323
282.337
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