Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi49g00110 ATGCCATCACGGCAACTCTCTCAATCTCAGCCGTCCACGTCAGACTTACCTGACCCATTCTCACCGCCACAAACACCCACCTCCTCCCCACCCCCACCGCCATCACAACCTCCTTACTCCTCTCCTCGCCGCCACCGCCTCCGCATGCTCCCTCCTCCTCCTCGCCCTCCTCTGCCGCCGCACCCTCACCCGAAAACGCACCGCCCCATTCTCCTCCGACACCGGACTCCTCCACCTCCTCCCCACCCCACCGCCTCTCCTACTCCCTCCTACGCCGCGCCACCGACTCCTTCTCCTCCCGCCTCGGCCACGGCGGCTTCGGCTCCGTCTTCGCCGGCACCCTCCCACCGCCGTCACGAAAACCCATCGCCGTCAAGCTCATGGACTCATCCTCCCACCAGGGCGAACGTGAGTTCCAAAACGAACTCTTCTTCGCCTCAAGGCTCCGTTCAAGCCACGTCATCGCTGCGGTTGGGTTTTCCTCAGACCCGAAACGACGCCGTTTCCTCCTCGTTTACGACCTCATGCAAAACGGGTCATTTGGGTGTGGACCAATCCCCTACTTCGCCGGAGACAATGGCGATAACCGCCTCCCCGGAGATGGGTTTGGCGATGGCTGCATCGCCGGGGTTTGATAAGGCTAGTGTGCAGAGTGAGAAGGATGTTGATGTTGTTGGAGGTTTTAAGAGGAATGGTAAAGGGCTAAAGAGTAATTCAGTGAGGGATTGGTGGTGGAAACATGACAATGAGGTTGTGGCTTCGGGTTTGGGTTCAACTCCGGTTGGTGAAGCTAAGAAGGTGAAGGATTATGTGATGGAGTGGCTTGGGAGGGAGAAGAAGATTAAGAGCAGAAGCAGGAATAACCGTGGTAGTGTAGATTGGTGGTTAGAAGGGTTCAGTGGAGAGCTATGGAGAGCACGCAGGAATAGCTTTGATTCTGTTAGTGGAGAAATTCCAAAGAGTGGTGGTGTGAGTAGTACTCCAAGTATGAGAGGAACTGTTTGTTATGTTGCTCCTGAGTATGGCTATGGTGGAGAAGTTTCAGAGAAGTGTGATGTATATAGCTTTGGGGTTTTATTGCTTGTTATCATTTCTGGGAGGCGTCCACTTCAGGTAACTGGTTCACCAATGTCAGAGTTTCAAAGAGCAAATCTTTTGTCATGGGCACGCCATTGTGCAAGGAATGGGAAGCTCATTGAGCTGGTTGATCAGTCCATTCAATCATTGGATAAAGAGCAGGCTCTTCTCTGTATCAAGGTGGCTTTGCTTTGTTTGCTTAAGATACCTGCTCGTCGTCCTTCAATGAAGGAGGTTGTGGGAATGCTTAGTGGTGAATTGGAGCCACCCCAATTGCCTGTTGAGTATTCACCTTCAACCCCTAATCGGTTCCCTTTCAAGTCTAGGAAAAAAGTCCGGTGA 1419 0.5307 MPSRQLSQSQPSTSDLPDPFSPPQTPTSSPPPPPSQPPYSSPRRHRLRMLPPPPRPPLPPHPHPKTHRPILLRHRTPPPPPHPTASPTPSYAAPPTPSPPASATAASAPSSPAPSHRRHENPSPSSSWTHPPTRANVSSKTNSSSPQGSVQATSSLRLGFPQTRNDAVSSSFTTSCKTGHLGVDQSPTSPETMAITASPEMGLAMAASPGFDKASVQSEKDVDVVGGFKRNGKGLKSNSVRDWWWKHDNEVVASGLGSTPVGEAKKVKDYVMEWLGREKKIKSRSRNNRGSVDWWLEGFSGELWRARRNSFDSVSGEIPKSGGVSSTPSMRGTVCYVAPEYGYGGEVSEKCDVYSFGVLLLVIISGRRPLQVTGSPMSEFQRANLLSWARHCARNGKLIELVDQSIQSLDKEQALLCIKVALLCLLKIPARRPSMKEVVGMLSGELEPPQLPVEYSPSTPNRFPFKSRKKVR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi49g00110 472 MobiDBLite consensus disorder prediction 1 15 - -
Sebi49g00110 472 MobiDBLite consensus disorder prediction 51 65 - -
Sebi49g00110 472 MobiDBLite consensus disorder prediction 16 40 - -
Sebi49g00110 472 Gene3D Transferase(Phosphotransferase) domain 1 311 449 - -
Sebi49g00110 472 MobiDBLite consensus disorder prediction 450 472 - -
Sebi49g00110 472 MobiDBLite consensus disorder prediction 73 102 - -
Sebi49g00110 472 SUPERFAMILY Protein kinase-like (PK-like) 326 458 IPR011009 -
Sebi49g00110 472 PANTHER OS07G0586332 PROTEIN 166 281 IPR044576 -
Sebi49g00110 472 Pfam Protein tyrosine and serine/threonine kinase 327 440 IPR001245 GO:0004672|GO:0006468
Sebi49g00110 472 MobiDBLite consensus disorder prediction 103 152 - -
Sebi49g00110 472 MobiDBLite consensus disorder prediction 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi49g00110 Sebi-Chr49 2393000 2395072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi49g00110 321 451 Receptor kinase-like Gene Family AT1G09970 35.821 8.77e-21 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Sebi49g00110 PK_Tyr_Ser-Thr 1.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi49g00110 - - lja:Lj2g3v0473820.1 373.629