Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi49g00079 ATGGCCAAGATGAAATGGGGTGCGTTTGGATTCTGGTTTTACCTTCTCTCCATCGTGATCTGCGCTAGGGTTTGCGCTCCGGCCAGATCCGACAAGGAAACCCGAGAGCGGTTCTATGGGAACATGCTCAACTCTTCTTCACCCGAATCCAACGATGGCACCTTGGCCAAGATGTTCGATCGCGTTCTCGAAAAGGAGTTCTCAGAGAATGACCAACCTGAAGTTCCTGATAAAAGCAGCTTCAATAGCAGTGTAGCTGATCAGCAGGCTGTATTGGAGACTGTAGCTAAAATTACTCATGAGAAAGCAAAGAGAAATGATACACATGAGGGAAATGGCACAAGACCATTTCAGTTTCAAGATGTGTTCTCCCTAGAAAATGAAGATTCTGATGATGTGACAACTTTGATTGACAAAAAGGACAATGTCTTTGTGATGTCAAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTGAGGCTAATATCAGACTTGGTGGTCGTCATAGTTTCTGCAGCCATTGGTGGAATTGTCTTTTCCTGTTTGGGGCAACCGGTTATCGTGGGCTATCTCCTTGCAGGCTCACTTATTGGACCAGGGGGTTTGAAATTCATTAGTGAAATGGTACAGGTTGAGACTGTTGCACAGTTTGGGGTGGTGTTTCTTCTCTTTGCTTTGGGGCTGGAGTTTTCCTTGGCAAAGTTAAAAGCTGTGGGGCCTGTTGCTGTTCTTGGAGGGCTGCTTCAAATTGTAATATTCATGTTCCTTTGTGGCATTCTTTCCATGTTATTTGGTGCCAAATTGTCTGAGGGTGTTTTTGTTGGTTCCTTTCTTTCAATGTCATCAACAGCAGTGGTGGTAAAGTTTTTGGTGGAGCGGAATAGTAATAGTGCTCTTCACGTTCAAGTCACAATTGGGACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGTCTTTTACAAGGAATAATTTCAATGGGAAAACTGTTGCTAGTGTTGTCCTTGTATCTCACTGCTACTTCTATATTGTCTTGGTCATTTGTTCCTCGCTTTCTTAAACTGATGATGCGACTCTCTTCTCAGACAAATGAACTTTATCAGCTAGCTTCCGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTTGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCTACAACAGACTTTGGTCAACATACTTTGGACCAGGTAGAACCAATTCGTAACCTATTTGCAGCTCTCTTCCTGTCGAGTATTGGAATGCTTATACATGTGCATTTCCTTTGGAACCATGTGGATATCTTGCTGGCATCTGTCATTTTGGTTATAGTTGTTAAAACTACTGTTGCTACTATAGTTACAAAGGCCTTTGGGTACAGCATTAAGACATCATTTATCGTTGGTATCTCACTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCTTGAGTCGCGCTTCAAATCTTCATCTTGTCGAGAGTAAGGAGACCAGCAAGTGTAAAGGATTGGACTCTGCCATTAGCTTCTTCATTTTGGAAGTTCTTCACGGGTCATCCTTGATTACTACATCTCACATGCAAAATACATCTGCTCGAGGAAGAATTGGGGGTAAAGCAGATGATGATTTTTTTATAACTAAGTGGATAATGCAAGGAACAACAGCATAA 1728 0.4213 MAKMKWGAFGFWFYLLSIVICARVCAPARSDKETRERFYGNMLNSSSPESNDGTLAKMFDRVLEKEFSENDQPEVPDKSSFNSSVADQQAVLETVAKITHEKAKRNDTHEGNGTRPFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGPVAVLGGLLQIVIFMFLCGILSMLFGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSNSALHVQVTIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIISMGKLLLVLSLYLTATSILSWSFVPRFLKLMMRLSSQTNELYQLASVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIVVKTTVATIVTKAFGYSIKTSFIVGISLAQIGEFAFVLLSRASNLHLVESKETSKCKGLDSAISFFILEVLHGSSLITTSHMQNTSARGRIGGKADDDFFITKWIMQGTTA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi49g00079 575 Gene3D - 160 523 IPR038770 -
Sebi49g00079 575 Pfam Sodium/hydrogen exchanger family 167 521 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi49g00079 575 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 15 515 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi49g00079 Sebi-Chr49 1446621 1456960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi49g00079 28 515 Antiporters AT5G51710 83.607 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi49g00079 K26735 - gmx:100799476 870.537