Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi49g00036 ATGGCTTCCCTTGCTGCTTCCACAGCAGCTGCTTCCCTTGGCATGTCAGAAATGCTTGGAAACCCCATCAACTTGAGTGGTGCCACAAGGTCAGCCCCATCTCCCTCTACCCCTGCTACCTTCAAAACTGTGGCTCTTTTCTCCAAAAAGAAGGCACCACCACCACCTCCTCCAAAGCAGAAACCTGCTGCTGTTTCTTCTGCCAATGATGAGCTCGCCAAGTGGTATGGTCCTGATAGAAGGATCTTCTTGCCAGATGGTCTCTTGGACCGATCTGAGATCCCAGAGTACTTGACTGGTGAAGTCCCTGGAGACTATGGTTATGACCCATTTCGTCTTAGCAAGAAGCCAGAGGACTTTGCTAAATATCAGGCATATGAATTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATTATTCCTGAGGCCTTCAACAAATTTGGAGCCAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGTGGCACGTTGAACTACTTCGGTAAACCCATCCCCATCAATCTTATTGTTGCTGTAGTTGCTGAGGTTGTTCTTTTAGGAGGTGCAGAGTACTACAGAATTATTAATGGCCTGGATTTTGAAGACAAGCTTCATCCAGGTGGTCCATTTGACCCATTGGGGCTTGCAAATGATCCAGACCAAGCTGCACTGCTAAAGGTGAAGGAAATTAAGAATGGAAGACTTGCTATGTTTGCCATGCTTGGTTTCTACTTCCAAGCTTATGTCACAGGAGAAGGTCCTGTTGAGAACTTCACAAAACATCTCAGTGACCCTTTTGGCAACAACTTGCTCACTGTCATTGCTGGGAATGCTGAGAGGGTTCCAACTCTGTGA 882 0.4739 MASLAASTAAASLGMSEMLGNPINLSGATRSAPSPSTPATFKTVALFSKKKAPPPPPPKQKPAAVSSANDELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFRLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEVVLLGGAEYYRIINGLDFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENFTKHLSDPFGNNLLTVIAGNAERVPTL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi49g00036 293 FunFam Chlorophyll a-b binding protein, chloroplastic 82 293 - -
Sebi49g00036 293 Gene3D Chlorophyll a/b binding protein domain 82 293 - -
Sebi49g00036 293 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 39 291 IPR001344 GO:0009765|GO:0016020
Sebi49g00036 293 MobiDBLite consensus disorder prediction 22 66 - -
Sebi49g00036 293 MobiDBLite consensus disorder prediction 22 43 - -
Sebi49g00036 293 Pfam Chlorophyll A-B binding protein 95 256 IPR022796 -
Sebi49g00036 293 SUPERFAMILY Chlorophyll a-b binding protein 75 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi49g00036 Sebi-Chr49 442557 445133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi49g00036 11 293 Chloroplast and Mitochondria Gene Families AT4G10340 81.338 2.13e-151 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi49g00036 K08916 - gmx:100806585 526.168