Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi49g00019 ATGTGCTTTTTGATGGATCCTCAAACTGGGAAGAAGGTCTGCTATGTCCAGTTTCCTCAGAGAGTTGATGGTATTGATACGCATGATCATTATGCCAACAGGAACACAGTTTTCTTTGATATTAACATAAAGGGTCTAGATGGTATTCAGGGTCCTGTATATGTGGGGACAAGATGTGTTTTTAGGAGGCAAGATTTGAAGAATAAGCATGCAAAGAGTGATGCATATGGAGAGGCTGCAAGCCTAAAAGGGATGGATGATGACAAAGAGCTGCTAATGTCCCAAATGAATTTTGAGAAGAAATTTGGGCAGTCATCTGTTTTTGTGACTTCTACCTTGATGGAAGAGGGTGGTGTACCTCCTTGCTCAAGTCCAGAAGCCCTGCTTAAAGAAGCCATTCATGTAATTAGCTGTGGATATGAAGATAAAACTGAATGGGGACTTGAGGTATATATAACAACAACAACAACTGCCTTATGA 480 0.4062 MCFLMDPQTGKKVCYVQFPQRVDGIDTHDHYANRNTVFFDINIKGLDGIQGPVYVGTRCVFRRQDLKNKHAKSDAYGEAASLKGMDDDKELLMSQMNFEKKFGQSSVFVTSTLMEEGGVPPCSSPEALLKEAIHVISCGYEDKTEWGLEVYITTTTTAL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi49g00019 159 Pfam Cellulose synthase 76 150 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi49g00019 159 Pfam Cellulose synthase 1 67 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi49g00019 159 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi49g00019 Sebi-Chr49 154000 154780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi49g00019 1 150 Cell Wall Biosynthesis AT5G17420 67.978 1.40e-74 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi49g00019 K10999 - gmx:100815436 264.233