Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi49g00013 ATGAGCTTGAAGATGCATCTTAGTTCGGAACCTGATGTGGTTGTAGAGGAGGTTGATCAACAACATACAGAGTTTCTTATTCTGGCTAATGATGGAATATGGAAGGTGATGTCAAACCAAGAAGCAGTGGATTCTATTAGACAAATAAAGGATGCTCAGGCAGCAGCAAAACATTTGATTGAAGAGGCTATTTCCAAGAAAAGTAAGGATGACATATCCTGCATAGTTGTGAAGTTCCAATGA 243 0.3909 MSLKMHLSSEPDVVVEEVDQQHTEFLILANDGIWKVMSNQEAVDSIRQIKDAQAAAKHLIEEAISKKSKDDISCIVVKFQ 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi49g00013 80 SUPERFAMILY PP2C-like 4 79 IPR036457 -
Sebi49g00013 80 ProSiteProfiles PPM-type phosphatase domain profile. 1 79 IPR001932 -
Sebi49g00013 80 CDD PP2Cc 3 79 IPR001932 -
Sebi49g00013 80 PANTHER PROTEIN PHOSPHATASE 3 79 IPR015655 GO:0004722|GO:0006470
Sebi49g00013 80 Gene3D - 1 80 IPR036457 -
Sebi49g00013 80 Pfam Protein phosphatase 2C 6 72 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi49g00013 Sebi-Chr49 99407 99843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi49g00013 2 80 PP2C-type Phosphatase Gene Family AT4G28400 73.418 1.27e-36 122