Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi499g00038 ATGGCAATTGGGTTCATGGAGGTTCTGCTGGTGAAAGCAAAGGGTCTTCAAGAAACTGATATCTTTGCTCGTATGGATCCGTATGTTCTGTTGCAATACAAAGGTCAAGAGCGCAAGAGCAGTGTAATTCATGAGGGGGGCAGCAATCCTGTATGGAATGAGAAAATTGTGTTCAGAGTGGAATACCCTGGATCAGGTGACCAATACAAGCTCAACCTGAAAATAATGGACAAGGATGTATTTTCTGCAGATGACTTTGTTGGCCAGGCCACAATCTATGTAAAGGATTTATTAGCAGATGGAGCAGAAAATGGATCAGCTGAGCTTCGTCCTCGCAAGTACAGTGTGGTTCGAGCTGACCAATCTTATTGTGGTGAAATTGAAGTTGGTATAACTTTCACCAGAAAGGAACAGGAATATATGGATGATGATGATATTGGAGGATGGAAGGAAAGTGAGTATTAG 465 0.4237 MAIGFMEVLLVKAKGLQETDIFARMDPYVLLQYKGQERKSSVIHEGGSNPVWNEKIVFRVEYPGSGDQYKLNLKIMDKDVFSADDFVGQATIYVKDLLADGAENGSAELRPRKYSVVRADQSYCGEIEVGITFTRKEQEYMDDDDIGGWKESEY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi499g00038 154 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Sebi499g00038 154 SMART C2_3c 5 106 IPR000008 -
Sebi499g00038 154 Pfam C2 domain 7 106 IPR000008 -
Sebi499g00038 154 CDD C2_putative_Elicitor-responsive_gene 4 127 - -
Sebi499g00038 154 Gene3D C2 domain 2 135 IPR035892 -
Sebi499g00038 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 135 IPR035892 -
Sebi499g00038 154 PANTHER C2 DOMAIN-CONTAINING 3 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi499g00038 Sebi-Chr499 727495 730045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi499g00038 3 109 C2H2 Transcription Factor Family AT4G21160 31.776 1.13e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi499g00038 - - gmx:100500493 285.034